Analysis of interatomic Contacts of Structural Units in PDB entry:
3MEU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MEU entry

There are 7 chains in PDB entry 3MEU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 114LYS 288
B
ARG 116LYS 291
C
ALA 1ALA 1
C
THR 3THR 3
C
GLN 5GLN 5
D
ALA 1ALA 1
D
THR 3THR 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3MEU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
114 130Right-handed alpha
Helix 2
2
A
223 227Right-handed 310
Helix 3
3
A
280 282Right-handed 310
Helix 4
4
B
116 130Right-handed alpha
Helix 5
5
B
223 227Right-handed 310
Helix 6
6
B
280 282Right-handed 310
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There are 4 sheets in PDB entry 3MEU. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
203 206first strand
Strand 2
A
189 194anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
260 264anti-parallel
Strand 6
A
277 279anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
210 212first strand
Strand 2
A
161 167anti-parallel
Strand 3
A
173 184anti-parallel
Strand 4
A
243 251anti-parallel
Strand 5
A
233 237anti-parallel
Strand 6
A
284 286anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
202 206first strand
Strand 2
B
189 194anti-parallel
Strand 3
B
173 184anti-parallel
Strand 4
B
243 251anti-parallel
Strand 5
B
260 264anti-parallel
Strand 6
B
277 279anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
210 212first strand
Strand 2
B
161 167anti-parallel
Strand 3
B
173 184anti-parallel
Strand 4
B
243 251anti-parallel
Strand 5
B
233 237anti-parallel
Strand 6
B
284 286anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il