Analysis of interatomic Contacts of Structural Units in PDB entry:
3MQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MQ6 entry

There are 16 chains in PDB entry 3MQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLY 339
B
 PRO 2GLY 339
C
 PRO 2GLY 339
D
 PRO 2GLY 339
E
 PRO 2GLY 339
F
 PRO 2GLY 339
G
 PRO 2GLY 339
H
 PRO 2GLY 339
L
 A 1 T 17
K
 A 1 T 17
N
 A 1 T 17
M
 A 1 T 17
P
 A 2 T 17
O
 A 1 T 17
R
 A 1 T 17
Q
 A 1 T 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are159 helices in PDB entry 3MQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 12Right-handed alpha
Helix 2
2
A
14 18Right-handed 310
Helix 3
3
A
38 48Right-handed alpha
Helix 4
4
A
56 62Right-handed alpha
Helix 5
5
A
63 84Right-handed alpha
Helix 6
6
A
85 87Right-handed 310
Helix 7
7
A
90 122Right-handed alpha
Helix 8
8
A
140 143Right-handed 310
Helix 9
9
A
155 160Right-handed 310
Helix 10
10
A
161 177Right-handed alpha
Helix 11
11
A
195 199Right-handed 310
Helix 12
12
A
201 206Right-handed 310
Helix 13
13
A
212 222Right-handed alpha
Helix 14
14
A
222 227Right-handed alpha
Helix 15
15
A
231 233Right-handed 310
Helix 16
16
A
246 249Right-handed 310
Helix 17
17
A
250 265Right-handed alpha
Helix 18
18
A
285 291Right-handed alpha
Helix 19
19
A
295 301Right-handed alpha
Helix 20
20
A
318 334Right-handed alpha
Helix 21
21
A
335 337Right-handed 310
Helix 22
22
B
6 13Right-handed alpha
Helix 23
23
B
14 18Right-handed 310
Helix 24
24
B
38 48Right-handed alpha
Helix 25
25
B
56 61Right-handed alpha
Helix 26
26
B
63 69Right-handed alpha
Helix 27
27
B
69 84Right-handed alpha
Helix 28
28
B
85 87Right-handed 310
Helix 29
29
B
90 122Right-handed alpha
Helix 30
30
B
140 143Right-handed 310
Helix 31
31
B
155 160Right-handed 310
Helix 32
32
B
161 177Right-handed alpha
Helix 33
33
B
195 199Right-handed 310
Helix 34
34
B
201 205Right-handed 310
Helix 35
35
B
212 227Right-handed alpha
Helix 36
36
B
231 233Right-handed 310
Helix 37
37
B
246 249Right-handed 310
Helix 38
38
B
250 267Right-handed alpha
Helix 39
39
B
285 291Right-handed alpha
Helix 40
40
B
295 302Right-handed alpha
Helix 41
41
B
318 334Right-handed alpha
Helix 42
42
B
335 337Right-handed 310
Helix 43
43
C
6 13Right-handed alpha
Helix 44
44
C
14 18Right-handed 310
Helix 45
45
C
38 48Right-handed alpha
Helix 46
46
C
56 62Right-handed alpha
Helix 47
47
C
63 84Right-handed alpha
Helix 48
48
C
85 87Right-handed 310
Helix 49
49
C
90 122Right-handed alpha
Helix 50
50
C
140 143Right-handed 310
Helix 51
51
C
155 160Right-handed 310
Helix 52
52
C
161 177Right-handed alpha
Helix 53
53
C
195 199Right-handed 310
Helix 54
54
C
201 206Right-handed 310
Helix 55
55
C
212 227Right-handed alpha
Helix 56
56
C
231 233Right-handed 310
Helix 57
57
C
250 269Right-handed alpha
Helix 58
58
C
285 291Right-handed alpha
Helix 59
59
C
318 334Right-handed alpha
Helix 60
60
C
335 337Right-handed 310
Helix 61
61
D
6 12Right-handed alpha
Helix 62
62
D
13 18Right-handed 310
Helix 63
63
D
38 48Right-handed alpha
Helix 64
64
D
56 62Right-handed alpha
Helix 65
65
D
63 84Right-handed alpha
Helix 66
66
D
85 87Right-handed 310
Helix 67
67
D
90 122Right-handed alpha
Helix 68
68
D
140 143Right-handed 310
Helix 69
69
D
155 160Right-handed 310
Helix 70
70
D
161 177Right-handed alpha
Helix 71
71
D
195 199Right-handed 310
Helix 72
72
D
201 205Right-handed 310
Helix 73
73
D
212 222Right-handed alpha
Helix 74
74
D
222 227Right-handed alpha
Helix 75
75
D
231 233Right-handed 310
Helix 76
76
D
246 249Right-handed 310
Helix 77
77
D
250 269Right-handed alpha
Helix 78
78
D
285 291Right-handed alpha
Helix 79
79
D
295 301Right-handed alpha
Helix 80
80
D
318 334Right-handed alpha
Helix 81
81
D
335 337Right-handed 310
Helix 82
82
E
6 12Right-handed alpha
Helix 83
83
E
14 18Right-handed 310
Helix 84
84
E
38 48Right-handed alpha
Helix 85
85
E
56 62Right-handed alpha
Helix 86
86
E
63 84Right-handed alpha
Helix 87
87
E
85 87Right-handed 310
Helix 88
88
E
90 122Right-handed alpha
Helix 89
89
E
140 143Right-handed 310
Helix 90
90
E
155 160Right-handed 310
Helix 91
91
E
161 178Right-handed alpha
Helix 92
92
E
195 199Right-handed 310
Helix 93
93
E
201 206Right-handed 310
Helix 94
94
E
212 227Right-handed alpha
Helix 95
95
E
231 233Right-handed 310
Helix 96
96
E
246 249Right-handed 310
Helix 97
97
E
250 268Right-handed alpha
Helix 98
98
E
285 291Right-handed alpha
Helix 99
99
E
295 302Right-handed alpha
Helix 100
100
E
318 334Right-handed alpha
Helix 101
101
E
335 337Right-handed 310
Helix 102
102
F
6 12Right-handed alpha
Helix 103
103
F
14 18Right-handed 310
Helix 104
104
F
38 48Right-handed alpha
Helix 105
105
F
56 61Right-handed alpha
Helix 106
106
F
63 84Right-handed alpha
Helix 107
107
F
85 87Right-handed 310
Helix 108
108
F
90 122Right-handed alpha
Helix 109
109
F
140 143Right-handed 310
Helix 110
110
F
155 160Right-handed 310
Helix 111
111
F
161 177Right-handed alpha
Helix 112
112
F
195 199Right-handed 310
Helix 113
113
F
201 205Right-handed 310
Helix 114
114
F
212 222Right-handed alpha
Helix 115
115
F
222 227Right-handed alpha
Helix 116
116
F
231 233Right-handed 310
Helix 117
117
F
250 265Right-handed alpha
Helix 118
118
F
285 291Right-handed alpha
Helix 119
119
F
295 302Right-handed alpha
Helix 120
120
F
318 334Right-handed alpha
Helix 121
121
F
335 337Right-handed 310
Helix 122
122
G
6 12Right-handed alpha
Helix 123
123
G
14 18Right-handed 310
Helix 124
124
G
38 48Right-handed alpha
Helix 125
125
G
56 62Right-handed alpha
Helix 126
126
G
63 84Right-handed alpha
Helix 127
127
G
85 87Right-handed 310
Helix 128
128
G
90 122Right-handed alpha
Helix 129
129
G
140 143Right-handed 310
Helix 130
130
G
155 160Right-handed 310
Helix 131
131
G
161 178Right-handed alpha
Helix 132
132
G
195 199Right-handed 310
Helix 133
133
G
201 206Right-handed 310
Helix 134
134
G
212 227Right-handed alpha
Helix 135
135
G
231 233Right-handed 310
Helix 136
136
G
246 249Right-handed 310
Helix 137
137
G
250 266Right-handed alpha
Helix 138
138
G
285 291Right-handed alpha
Helix 139
139
G
295 301Right-handed alpha
Helix 140
140
G
318 334Right-handed alpha
Helix 141
141
G
335 337Right-handed 310
Helix 142
142
H
6 12Right-handed alpha
Helix 143
143
H
14 18Right-handed 310
Helix 144
144
H
38 48Right-handed alpha
Helix 145
145
H
56 62Right-handed alpha
Helix 146
146
H
63 84Right-handed alpha
Helix 147
147
H
85 87Right-handed 310
Helix 148
148
H
90 122Right-handed alpha
Helix 149
149
H
140 143Right-handed 310
Helix 150
150
H
155 160Right-handed 310
Helix 151
151
H
161 176Right-handed alpha
Helix 152
152
H
195 199Right-handed 310
Helix 153
153
H
201 206Right-handed 310
Helix 154
154
H
212 227Right-handed alpha
Helix 155
155
H
246 249Right-handed 310
Helix 156
156
H
250 269Right-handed alpha
Helix 157
157
H
286 291Right-handed alpha
Helix 158
158
H
318 334Right-handed alpha
Helix 159
159
H
335 337Right-handed 310
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There are 16 sheets in PDB entry 3MQ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
H
35 37anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
H
20 22anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
189 193anti-parallel
Strand 3
A
235 241anti-parallel
Strand 4
A
275 278parallel
Strand 5
A
313 314parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 22first strand
Strand 2
G
35 37anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 37first strand
Strand 2
G
20 22anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
189 193anti-parallel
Strand 3
B
235 241anti-parallel
Strand 4
B
275 278parallel
Strand 5
B
313 314parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 22first strand
Strand 2
F
35 37anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 37first strand
Strand 2
F
20 22anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 149first strand
Strand 2
C
189 193anti-parallel
Strand 3
C
235 241anti-parallel
Strand 4
C
275 278parallel
Strand 5
C
312 314parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 22first strand
Strand 2
E
35 37anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 37first strand
Strand 2
E
20 22anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 149first strand
Strand 2
D
189 193anti-parallel
Strand 3
D
235 242anti-parallel
Strand 4
D
275 279parallel
Strand 5
D
312 314parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
145 149first strand
Strand 2
E
189 193anti-parallel
Strand 3
E
235 241anti-parallel
Strand 4
E
275 278parallel
Strand 5
E
312 314parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
145 149first strand
Strand 2
F
189 193anti-parallel
Strand 3
F
235 241anti-parallel
Strand 4
F
275 278parallel
Strand 5
F
312 314parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
145 149first strand
Strand 2
G
189 193anti-parallel
Strand 3
G
235 241anti-parallel
Strand 4
G
275 278parallel
Strand 5
G
313 314parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
145 149first strand
Strand 2
H
189 193anti-parallel
Strand 3
H
235 241anti-parallel
Strand 4
H
275 278parallel
Strand 5
H
312 314parallel
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