Analysis of interatomic Contacts of Structural Units in PDB entry:
3MSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MSX entry

There are 2 chains in PDB entry 3MSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4GLN 180
B
 GLY 360PHE 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3MSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 28Right-handed alpha
Helix 2
2
A
63 67Right-handed 310
Helix 3
3
A
69 74Right-handed 310
Helix 4
4
A
88 98Right-handed alpha
Helix 5
5
A
98 107Right-handed alpha
Helix 6
6
A
118 122Right-handed 310
Helix 7
7
A
124 134Right-handed alpha
Helix 8
8
A
140 152Right-handed alpha
Helix 9
9
A
166 180Right-handed alpha
Helix 10
10
B
366 371Right-handed alpha
Helix 11
11
B
372 375Right-handed 310
Helix 12
12
B
377 391Right-handed alpha
Helix 13
13
B
392 394Right-handed 310
Helix 14
14
B
403 416Right-handed alpha
Helix 15
15
B
426 440Right-handed alpha
Helix 16
16
B
447 449Right-handed 310
Helix 17
17
B
450 457Right-handed alpha
Helix 18
18
B
458 460Right-handed 310
Helix 19
19
B
462 475Right-handed alpha
Helix 20
20
B
478 497Right-handed alpha
Helix 21
21
B
498 503Right-handed alpha
Helix 22
22
B
505 518Right-handed alpha
Helix 23
23
B
525 551Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3MSX.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 48first strand
Strand 2
A
51 60anti-parallel
Strand 3
A
5 12parallel
Strand 4
A
79 85parallel
Strand 5
A
112 117parallel
Strand 6
A
155 158parallel
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