Analysis of interatomic Contacts of Structural Units in PDB entry:
3MTG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MTG entry

There are 2 chains in PDB entry 3MTG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 101TYR 530
B
GLY 101TYR 530
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3MTG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
112 125Right-handed alpha
Helix 2
2
A
127 138Right-handed alpha
Helix 3
3
A
155 168Right-handed alpha
Helix 4
4
A
183 194Right-handed alpha
Helix 5
5
A
204 217Right-handed alpha
Helix 6
6
A
231 241Right-handed alpha
Helix 7
7
A
241 246Right-handed alpha
Helix 8
8
A
255 266Right-handed alpha
Helix 9
9
A
281 294Right-handed alpha
Helix 10
10
A
298 306Right-handed alpha
Helix 11
11
A
320 334Right-handed alpha
Helix 12
12
A
343 353Right-handed alpha
Helix 13
13
A
359 363Right-handed 310
Helix 14
14
A
381 388Right-handed alpha
Helix 15
15
A
405 410Right-handed 310
Helix 16
16
A
439 441Right-handed 310
Helix 17
17
A
443 447Right-handed 310
Helix 18
18
A
451 472Right-handed alpha
Helix 19
19
A
485 497Right-handed alpha
Helix 20
20
A
498 501Right-handed 310
Helix 21
21
A
508 515Right-handed alpha
Helix 22
22
B
112 127Right-handed alpha
Helix 23
23
B
127 138Right-handed alpha
Helix 24
24
B
155 166Right-handed alpha
Helix 25
25
B
167 169Right-handed 310
Helix 26
26
B
183 194Right-handed alpha
Helix 27
27
B
204 217Right-handed alpha
Helix 28
28
B
231 240Right-handed alpha
Helix 29
29
B
241 247Right-handed alpha
Helix 30
30
B
255 266Right-handed alpha
Helix 31
31
B
281 294Right-handed alpha
Helix 32
32
B
298 306Right-handed alpha
Helix 33
33
B
320 333Right-handed alpha
Helix 34
34
B
343 353Right-handed alpha
Helix 35
35
B
359 363Right-handed 310
Helix 36
36
B
381 388Right-handed alpha
Helix 37
37
B
405 410Right-handed 310
Helix 38
38
B
439 441Right-handed 310
Helix 39
39
B
451 471Right-handed alpha
Helix 40
40
B
485 495Right-handed alpha
Helix 41
41
B
496 501Right-handed 310
Helix 42
42
B
508 515Right-handed alpha
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There are 4 sheets in PDB entry 3MTG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
196 197first strand
Strand 2
A
171 175parallel
Strand 3
A
147 151parallel
Strand 4
A
225 228parallel
Strand 5
A
250 253parallel
Strand 6
A
275 277parallel
Strand 7
A
481 482parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
356 357first strand
Strand 2
A
336 340parallel
Strand 3
A
313 317parallel
Strand 4
A
369 372parallel
Strand 5
A
392 396parallel
Strand 6
A
433 437parallel
Strand 7
A
423 427anti-parallel
Strand 8
A
415 420anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
196 198first strand
Strand 2
B
171 175parallel
Strand 3
B
147 151parallel
Strand 4
B
225 228parallel
Strand 5
B
250 253parallel
Strand 6
B
275 277parallel
Strand 7
B
481 483parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
356 357first strand
Strand 2
B
336 340parallel
Strand 3
B
313 317parallel
Strand 4
B
369 372parallel
Strand 5
B
393 396parallel
Strand 6
B
433 437parallel
Strand 7
B
423 427anti-parallel
Strand 8
B
415 420anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il