Analysis of interatomic Contacts of Structural Units in PDB entry:
3MV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MV2 entry

There are 6 chains in PDB entry 3MV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO -2VAL 1201
B
MET 1ASP 293
C
MET 0VAL 1201
D
MET 1ASP 293
E
MET 0VAL 1201
F
MET 1ASP 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 3MV2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
-1 908Right-handed alpha
Helix 2
2
A
910 917Right-handed alpha
Helix 3
3
A
919 932Right-handed alpha
Helix 4
4
A
936 938Right-handed 310
Helix 5
5
A
939 950Right-handed alpha
Helix 6
6
A
976 980Right-handed 310
Helix 7
7
A
986 1003Right-handed alpha
Helix 8
8
A
1005 1022Right-handed alpha
Helix 9
9
A
1028 1056Right-handed alpha
Helix 10
10
A
1061 1072Right-handed alpha
Helix 11
11
A
1073 1075Right-handed 310
Helix 12
12
A
1078 1096Right-handed alpha
Helix 13
13
A
1098 1111Right-handed alpha
Helix 14
14
A
1116 1131Right-handed alpha
Helix 15
15
A
1176 1178Right-handed 310
Helix 16
16
B
3 11Right-handed alpha
Helix 17
17
B
14 19Right-handed alpha
Helix 18
18
B
19 24Right-handed alpha
Helix 19
19
B
30 44Right-handed alpha
Helix 20
20
B
56 68Right-handed alpha
Helix 21
21
B
72 78Right-handed alpha
Helix 22
22
B
85 100Right-handed alpha
Helix 23
23
B
101 114Right-handed alpha
Helix 24
24
B
120 135Right-handed alpha
Helix 25
25
B
137 152Right-handed alpha
Helix 26
26
B
153 176Right-handed alpha
Helix 27
27
B
181 192Right-handed alpha
Helix 28
28
B
196 211Right-handed alpha
Helix 29
29
B
212 225Right-handed alpha
Helix 30
30
B
225 230Right-handed alpha
Helix 31
31
B
233 237Right-handed 310
Helix 32
32
B
239 254Right-handed alpha
Helix 33
33
B
258 268Right-handed alpha
Helix 34
34
B
272 291Right-handed alpha
Helix 35
35
C
0 908Right-handed alpha
Helix 36
36
C
910 917Right-handed alpha
Helix 37
37
C
919 932Right-handed alpha
Helix 38
38
C
936 938Right-handed 310
Helix 39
39
C
939 950Right-handed alpha
Helix 40
40
C
976 980Right-handed 310
Helix 41
41
C
986 1003Right-handed alpha
Helix 42
42
C
1005 1022Right-handed alpha
Helix 43
43
C
1028 1056Right-handed alpha
Helix 44
44
C
1061 1072Right-handed alpha
Helix 45
45
C
1073 1075Right-handed 310
Helix 46
46
C
1078 1096Right-handed alpha
Helix 47
47
C
1098 1111Right-handed alpha
Helix 48
48
C
1116 1131Right-handed alpha
Helix 49
49
C
1176 1178Right-handed 310
Helix 50
50
D
3 11Right-handed alpha
Helix 51
51
D
14 19Right-handed alpha
Helix 52
52
D
19 24Right-handed alpha
Helix 53
53
D
30 44Right-handed alpha
Helix 54
54
D
56 68Right-handed alpha
Helix 55
55
D
72 78Right-handed alpha
Helix 56
56
D
85 100Right-handed alpha
Helix 57
57
D
101 114Right-handed alpha
Helix 58
58
D
120 135Right-handed alpha
Helix 59
59
D
137 152Right-handed alpha
Helix 60
60
D
153 176Right-handed alpha
Helix 61
61
D
181 192Right-handed alpha
Helix 62
62
D
196 211Right-handed alpha
Helix 63
63
D
212 225Right-handed alpha
Helix 64
64
D
225 230Right-handed alpha
Helix 65
65
D
233 237Right-handed 310
Helix 66
66
D
239 254Right-handed alpha
Helix 67
67
D
258 268Right-handed alpha
Helix 68
68
D
272 291Right-handed alpha
Helix 69
69
E
0 908Right-handed alpha
Helix 70
70
E
910 917Right-handed alpha
Helix 71
71
E
919 932Right-handed alpha
Helix 72
72
E
936 938Right-handed 310
Helix 73
73
E
939 950Right-handed alpha
Helix 74
74
E
976 980Right-handed 310
Helix 75
75
E
986 1003Right-handed alpha
Helix 76
76
E
1005 1022Right-handed alpha
Helix 77
77
E
1028 1056Right-handed alpha
Helix 78
78
E
1061 1072Right-handed alpha
Helix 79
79
E
1073 1075Right-handed 310
Helix 80
80
E
1078 1096Right-handed alpha
Helix 81
81
E
1098 1111Right-handed alpha
Helix 82
82
E
1116 1131Right-handed alpha
Helix 83
83
E
1176 1178Right-handed 310
Helix 84
84
F
3 11Right-handed alpha
Helix 85
85
F
14 19Right-handed alpha
Helix 86
86
F
19 24Right-handed alpha
Helix 87
87
F
30 44Right-handed alpha
Helix 88
88
F
56 68Right-handed alpha
Helix 89
89
F
72 78Right-handed alpha
Helix 90
90
F
85 100Right-handed alpha
Helix 91
91
F
101 114Right-handed alpha
Helix 92
92
F
120 135Right-handed alpha
Helix 93
93
F
137 152Right-handed alpha
Helix 94
94
F
153 176Right-handed alpha
Helix 95
95
F
181 192Right-handed alpha
Helix 96
96
F
196 211Right-handed alpha
Helix 97
97
F
212 225Right-handed alpha
Helix 98
98
F
225 230Right-handed alpha
Helix 99
99
F
233 237Right-handed 310
Helix 100
100
F
239 254Right-handed alpha
Helix 101
101
F
258 268Right-handed alpha
Helix 102
102
F
272 291Right-handed alpha
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There are 9 sheets in PDB entry 3MV2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
951 954first strand
Strand 2
A
964 967anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1147 1149first strand
Strand 2
A
1156 1158anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1163 1165first strand
Strand 2
A
1172 1174anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
951 954first strand
Strand 2
C
964 967anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1147 1149first strand
Strand 2
C
1156 1158anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1163 1165first strand
Strand 2
C
1172 1174anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
951 954first strand
Strand 2
E
964 967anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1147 1149first strand
Strand 2
E
1156 1158anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1163 1165first strand
Strand 2
E
1172 1174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il