Analysis of interatomic Contacts of Structural Units in PDB entry:
3N1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N1G entry

There are 4 chains in PDB entry 3N1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLN 39ASP 189
C
GLU 710LYS 813
A
GLN 39ASP 189
D
GLU 710LYS 813
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3N1G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
71 76Right-handed alpha
Helix 2
2
B
94 96Right-handed 310
Helix 3
3
B
100 118Right-handed alpha
Helix 4
4
B
139 144Right-handed 310
Helix 5
5
B
155 157Right-handed 310
Helix 6
6
B
158 169Right-handed alpha
Helix 7
7
C
736 741Right-handed 310
Helix 8
8
C
759 763Right-handed 310
Helix 9
9
A
71 76Right-handed alpha
Helix 10
10
A
94 96Right-handed 310
Helix 11
11
A
100 118Right-handed alpha
Helix 12
12
A
139 144Right-handed 310
Helix 13
13
A
155 157Right-handed 310
Helix 14
14
A
158 169Right-handed alpha
Helix 15
15
D
759 763Right-handed 310
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There are 8 sheets in PDB entry 3N1G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
48 49first strand
Strand 2
B
173 175anti-parallel
Strand 3
B
182 185anti-parallel
Strand 4
B
146 151anti-parallel
Strand 5
B
123 127anti-parallel
Strand 6
B
85 87parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
78 79first strand
Strand 2
B
98 99anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
717 725first strand
Strand 2
C
728 734anti-parallel
Strand 3
C
774 777anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
764 769first strand
Strand 2
C
747 754anti-parallel
Strand 3
C
785 793anti-parallel
Strand 4
C
805 808anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 49first strand
Strand 2
A
173 175anti-parallel
Strand 3
A
182 185anti-parallel
Strand 4
A
146 151anti-parallel
Strand 5
A
123 127anti-parallel
Strand 6
A
85 87parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 79first strand
Strand 2
A
98 99anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
717 723first strand
Strand 2
D
729 734anti-parallel
Strand 3
D
774 777anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
764 769first strand
Strand 2
D
747 754anti-parallel
Strand 3
D
785 793anti-parallel
Strand 4
D
805 808anti-parallel
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