Analysis of interatomic Contacts of Structural Units in PDB entry:
3N5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3N5N entry

There are 2 chains in PDB entry 3N5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 SER 68ASN 343
Y
 SER 68ASN 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3N5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
75 94Right-handed alpha
Helix 2
2
X
97 106Right-handed alpha
Helix 3
3
X
108 125Right-handed alpha
Helix 4
4
X
127 142Right-handed alpha
Helix 5
5
X
144 150Right-handed alpha
Helix 6
6
X
152 161Right-handed alpha
Helix 7
7
X
165 183Right-handed alpha
Helix 8
8
X
190 198Right-handed alpha
Helix 9
9
X
202 214Right-handed alpha
Helix 10
10
X
222 233Right-handed alpha
Helix 11
11
X
241 256Right-handed alpha
Helix 12
12
X
260 275Right-handed alpha
Helix 13
13
X
288 291Right-handed 310
Helix 14
14
X
292 306Right-handed alpha
Helix 15
15
X
318 322Right-handed 310
Helix 16
16
Y
75 94Right-handed alpha
Helix 17
17
Y
97 106Right-handed alpha
Helix 18
18
Y
108 126Right-handed alpha
Helix 19
19
Y
127 142Right-handed alpha
Helix 20
20
Y
144 150Right-handed alpha
Helix 21
21
Y
152 161Right-handed alpha
Helix 22
22
Y
165 183Right-handed alpha
Helix 23
23
Y
190 198Right-handed alpha
Helix 24
24
Y
202 215Right-handed alpha
Helix 25
25
Y
222 233Right-handed alpha
Helix 26
26
Y
241 256Right-handed alpha
Helix 27
27
Y
260 275Right-handed alpha
Helix 28
28
Y
282 286Right-handed 310
Helix 29
29
Y
288 291Right-handed 310
Helix 30
30
Y
292 306Right-handed alpha
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There are no sheets in PDB entry 3N5N
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il