Analysis of interatomic Contacts of Structural Units in PDB entry:
3OE0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OE0 entry

There are 5 chains in PDB entry 3OE0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 25ALA 303
I
 ARG 1ARG 2
I
 CYS 4LYS 7
I
 PRO 9ARG 11
I
 CYS 13GLY 15
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3OE0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 39Right-handed alpha
Helix 2
2
A
39 63Right-handed alpha
Helix 3
3
A
71 89Right-handed alpha
Helix 4
4
A
90 100Right-handed alpha
Helix 5
5
A
104 140Right-handed alpha
Helix 6
6
A
141 143Right-handed 310
Helix 7
7
A
144 154Right-handed alpha
Helix 8
8
A
154 160Right-handed alpha
Helix 9
9
A
160 168Right-handed alpha
Helix 10
10
A
168 174Right-handed alpha
Helix 11
11
A
192 208Right-handed alpha
Helix 12
12
A
208 1011Right-handed alpha
Helix 13
13
A
1038 1051Right-handed alpha
Helix 14
14
A
1059 1080Right-handed alpha
Helix 15
15
A
1083 1091Right-handed alpha
Helix 16
16
A
1092 1113Right-handed alpha
Helix 17
17
A
1114 1123Right-handed alpha
Helix 18
18
A
1125 1135Right-handed alpha
Helix 19
19
A
1136 1142Right-handed alpha
Helix 20
20
A
1142 1156Right-handed alpha
Helix 21
21
A
238 267Right-handed alpha
Helix 22
22
A
272 292Right-handed alpha
Helix 23
23
A
293 302Right-handed alpha
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There are 2 sheets in PDB entry 3OE0. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
184 190anti-parallel
Strand 3
I
4 5parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1013 1019first strand
Strand 2
A
1025 1029anti-parallel
Strand 3
A
1031 1034anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il