Analysis of interatomic Contacts of Structural Units in PDB entry:
3OV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3OV6 entry

There is 1 chain in PDB entry 3OV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 1000HIS 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3OV6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1096 1100Right-handed 310
Helix 2
2
A
59 83Right-handed alpha
Helix 3
3
A
138 151Right-handed alpha
Helix 4
4
A
154 165Right-handed alpha
Helix 5
5
A
165 182Right-handed alpha
Helix 6
6
A
255 257Right-handed 310
Helix 7
7
A
266 270Right-handed 310
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There are 7 sheets in PDB entry 3OV6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1006 1011first strand
Strand 2
A
1021 1030anti-parallel
Strand 3
A
1062 1070anti-parallel
Strand 4
A
1050 1051anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1006 1011first strand
Strand 2
A
1021 1030anti-parallel
Strand 3
A
1062 1070anti-parallel
Strand 4
A
1055 1056anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1044 1045first strand
Strand 2
A
1035 1041anti-parallel
Strand 3
A
1078 1084anti-parallel
Strand 4
A
1091 1095anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
46 49first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
24 32anti-parallel
Strand 4
A
7 18anti-parallel
Strand 5
A
94 105anti-parallel
Strand 6
A
110 118anti-parallel
Strand 7
A
121 127anti-parallel
Strand 8
A
130 133anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 194first strand
Strand 2
A
202 212anti-parallel
Strand 3
A
244 253anti-parallel
Strand 4
A
232 233anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
189 194first strand
Strand 2
A
202 212anti-parallel
Strand 3
A
244 253anti-parallel
Strand 4
A
237 238anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
226 227first strand
Strand 2
A
218 223anti-parallel
Strand 3
A
260 265anti-parallel
Strand 4
A
274 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il