Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q0S entry

There are 2 chains in PDB entry 3Q0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 706TYR 1048
B
 U 1 C 8
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3Q0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
708 716Right-handed alpha
Helix 2
2
A
723 728Right-handed 310
Helix 3
3
A
730 736Right-handed alpha
Helix 4
4
A
737 749Right-handed alpha
Helix 5
5
A
752 765Right-handed alpha
Helix 6
6
A
766 772Right-handed alpha
Helix 7
7
A
775 787Right-handed alpha
Helix 8
8
A
788 800Right-handed alpha
Helix 9
9
A
802 808Right-handed alpha
Helix 10
10
A
811 823Right-handed alpha
Helix 11
11
A
827 836Right-handed alpha
Helix 12
12
A
840 846Right-handed alpha
Helix 13
13
A
849 861Right-handed alpha
Helix 14
14
A
862 865Right-handed 310
Helix 15
15
A
866 873Right-handed alpha
Helix 16
16
A
876 882Right-handed alpha
Helix 17
17
A
885 897Right-handed alpha
Helix 18
18
A
898 911Right-handed alpha
Helix 19
19
A
912 918Right-handed alpha
Helix 20
20
A
921 933Right-handed alpha
Helix 21
21
A
934 946Right-handed alpha
Helix 22
22
A
948 954Right-handed alpha
Helix 23
23
A
957 969Right-handed alpha
Helix 24
24
A
970 983Right-handed alpha
Helix 25
25
A
990 998Right-handed alpha
Helix 26
26
A
1000 1012Right-handed alpha
Helix 27
27
A
1013 1025Right-handed alpha
Helix 28
28
A
1026 1028Right-handed 310
Helix 29
29
A
1042 1046Right-handed 310
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There are no sheets in PDB entry 3Q0S
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il