Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q6Z entry

There is 1 chain in PDB entry 3Q6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
CYS 792PHE 978
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3Q6Z. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
831 842Right-handed alpha
Helix 2
2
A
843 857Right-handed alpha
Helix 3
3
A
886 888Right-handed 310
Helix 4
4
A
889 911Right-handed alpha
Helix 5
5
A
929 945Right-handed alpha
Helix 6
6
A
963 978Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3Q6Z.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
794 799first strand
Strand 2
A
802 808anti-parallel
Strand 3
A
956 961parallel
Strand 4
A
915 918parallel
Strand 5
A
818 823parallel
Strand 6
A
876 881parallel
Strand 7
A
864 868anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il