Analysis of interatomic Contacts of Structural Units in PDB entry:
3RKQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RKQ entry

There are 4 chains in PDB entry 3RKQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 137LYS 194
B
GLY 137SER 193
C
T 1 A 19
D
T 1 A 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3RKQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
146 158Right-handed alpha
Helix 2
2
A
164 176Right-handed alpha
Helix 3
3
A
178 194Right-handed alpha
Helix 4
4
B
146 158Right-handed alpha
Helix 5
5
B
164 176Right-handed alpha
Helix 6
6
B
178 193Right-handed alpha
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There are no sheets in PDB entry 3RKQ

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il