Analysis of interatomic Contacts of Structural Units in PDB entry:
3RZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RZE entry

There is 1 chain in PDB entry 3RZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 28ILE 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3RZE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
28 31Right-handed 310
Helix 2
2
A
32 55Right-handed alpha
Helix 3
3
A
60 62Right-handed 310
Helix 4
4
A
63 79Right-handed alpha
Helix 5
5
A
79 90Right-handed alpha
Helix 6
6
A
95 131Right-handed alpha
Helix 7
7
A
140 156Right-handed alpha
Helix 8
8
A
158 164Right-handed alpha
Helix 9
9
A
187 199Right-handed alpha
Helix 10
10
A
199 217Right-handed alpha
Helix 11
11
A
1002 1012Right-handed alpha
Helix 12
12
A
1038 1051Right-handed alpha
Helix 13
13
A
1059 1080Right-handed alpha
Helix 14
14
A
1084 1091Right-handed alpha
Helix 15
15
A
1092 1107Right-handed alpha
Helix 16
16
A
1107 1112Right-handed alpha
Helix 17
17
A
1114 1123Right-handed alpha
Helix 18
18
A
1125 1134Right-handed alpha
Helix 19
19
A
1136 1142Right-handed alpha
Helix 20
20
A
1142 1156Right-handed alpha
Helix 21
21
A
1158 405Right-handed 310
Helix 22
22
A
407 442Right-handed alpha
Helix 23
23
A
449 472Right-handed alpha
Helix 24
24
A
472 484Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3RZE.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1013 1019first strand
Strand 2
A
1025 1029anti-parallel
Strand 3
A
1031 1032anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il