Analysis of interatomic Contacts of Structural Units in PDB entry:
3SQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SQJ entry

There are 2 chains in PDB entry 3SQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3GLY 584
B
 HIS 3GLY 584
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 3SQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
15 31Right-handed alpha
Helix 3
3
A
35 56Right-handed alpha
Helix 4
4
A
65 75Right-handed alpha
Helix 5
5
A
79 85Right-handed alpha
Helix 6
6
A
86 93Right-handed 310
Helix 7
7
A
96 106Right-handed alpha
Helix 8
8
A
119 130Right-handed alpha
Helix 9
9
A
130 146Right-handed alpha
Helix 10
10
A
150 169Right-handed alpha
Helix 11
11
A
173 223Right-handed alpha
Helix 12
12
A
227 248Right-handed alpha
Helix 13
13
A
249 266Right-handed alpha
Helix 14
14
A
267 271Right-handed 310
Helix 15
15
A
275 281Right-handed alpha
Helix 16
16
A
282 292Right-handed alpha
Helix 17
17
A
305 310Right-handed alpha
Helix 18
18
A
314 322Right-handed alpha
Helix 19
19
A
322 338Right-handed alpha
Helix 20
20
A
342 362Right-handed alpha
Helix 21
21
A
365 371Right-handed alpha
Helix 22
22
A
372 398Right-handed alpha
Helix 23
23
A
399 415Right-handed alpha
Helix 24
24
A
419 439Right-handed alpha
Helix 25
25
A
441 467Right-handed alpha
Helix 26
26
A
470 479Right-handed alpha
Helix 27
27
A
483 490Right-handed alpha
Helix 28
28
A
510 516Right-handed 310
Helix 29
29
A
517 536Right-handed alpha
Helix 30
30
A
540 559Right-handed alpha
Helix 31
31
A
564 583Right-handed alpha
Helix 32
32
B
5 15Right-handed alpha
Helix 33
33
B
15 31Right-handed alpha
Helix 34
34
B
35 56Right-handed alpha
Helix 35
35
B
65 76Right-handed alpha
Helix 36
36
B
79 85Right-handed alpha
Helix 37
37
B
86 93Right-handed 310
Helix 38
38
B
96 106Right-handed alpha
Helix 39
39
B
119 130Right-handed alpha
Helix 40
40
B
130 146Right-handed alpha
Helix 41
41
B
150 169Right-handed alpha
Helix 42
42
B
173 223Right-handed alpha
Helix 43
43
B
227 248Right-handed alpha
Helix 44
44
B
249 267Right-handed alpha
Helix 45
45
B
267 272Right-handed alpha
Helix 46
46
B
277 281Right-handed 310
Helix 47
47
B
282 292Right-handed alpha
Helix 48
48
B
305 310Right-handed alpha
Helix 49
49
B
314 322Right-handed alpha
Helix 50
50
B
322 337Right-handed alpha
Helix 51
51
B
342 361Right-handed alpha
Helix 52
52
B
365 371Right-handed alpha
Helix 53
53
B
372 415Right-handed alpha
Helix 54
54
B
419 439Right-handed alpha
Helix 55
55
B
441 467Right-handed alpha
Helix 56
56
B
470 479Right-handed alpha
Helix 57
57
B
480 490Right-handed alpha
Helix 58
58
B
504 508Right-handed 310
Helix 59
59
B
511 516Right-handed 310
Helix 60
60
B
517 536Right-handed alpha
Helix 61
61
B
540 559Right-handed alpha
Helix 62
62
B
564 580Right-handed alpha
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There are no sheets in PDB entry 3SQJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il