Analysis of interatomic Contacts of Structural Units in PDB entry:
3THY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3THY entry

There are 2 chains in PDB entry 3THY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 13ILE 930
B
LYS 217PHE 630
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 3THY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
47 57Right-handed alpha
Helix 3
3
A
69 73Right-handed 310
Helix 4
4
A
82 95Right-handed alpha
Helix 5
5
A
131 136Right-handed alpha
Helix 6
6
A
184 195Right-handed alpha
Helix 7
7
A
207 221Right-handed alpha
Helix 8
8
A
228 233Right-handed 310
Helix 9
9
A
236 245Right-handed alpha
Helix 10
10
A
258 262Right-handed 310
Helix 11
11
A
263 278Right-handed alpha
Helix 12
12
A
279 286Right-handed 310
Helix 13
13
A
295 299Right-handed 310
Helix 14
14
A
303 310Right-handed alpha
Helix 15
15
A
326 331Right-handed alpha
Helix 16
16
A
335 348Right-handed alpha
Helix 17
17
A
352 368Right-handed alpha
Helix 18
18
A
369 378Right-handed alpha
Helix 19
19
A
380 384Right-handed 310
Helix 20
20
A
386 394Right-handed alpha
Helix 21
21
A
400 412Right-handed alpha
Helix 22
22
A
413 425Right-handed alpha
Helix 23
23
A
429 458Right-handed alpha
Helix 24
24
A
475 492Right-handed alpha
Helix 25
25
A
493 503Right-handed alpha
Helix 26
26
A
526 531Right-handed alpha
Helix 27
27
A
532 535Right-handed 310
Helix 28
28
A
553 564Right-handed alpha
Helix 29
29
A
567 586Right-handed alpha
Helix 30
30
A
588 614Right-handed alpha
Helix 31
31
A
674 691Right-handed alpha
Helix 32
32
A
724 739Right-handed alpha
Helix 33
33
A
755 773Right-handed alpha
Helix 34
34
A
784 788Right-handed 310
Helix 35
35
A
789 794Right-handed alpha
Helix 36
36
A
826 834Right-handed alpha
Helix 37
37
A
837 851Right-handed alpha
Helix 38
38
A
874 893Right-handed alpha
Helix 39
39
A
900 917Right-handed alpha
Helix 40
40
A
920 929Right-handed alpha
Helix 41
41
B
221 233Right-handed alpha
Helix 42
42
B
251 261Right-handed alpha
Helix 43
43
B
280 291Right-handed alpha
Helix 44
44
B
303 308Right-handed alpha
Helix 45
45
B
404 413Right-handed alpha
Helix 46
46
B
424 438Right-handed alpha
Helix 47
47
B
450 454Right-handed 310
Helix 48
48
B
455 467Right-handed alpha
Helix 49
49
B
487 504Right-handed alpha
Helix 50
50
B
505 510Right-handed 310
Helix 51
51
B
512 514Right-handed 310
Helix 52
52
B
529 536Right-handed alpha
Helix 53
53
B
550 556Right-handed alpha
Helix 54
54
B
560 573Right-handed alpha
Helix 55
55
B
577 594Right-handed alpha
Helix 56
56
B
597 607Right-handed alpha
Helix 57
57
B
611 621Right-handed alpha
Helix 58
58
B
625 654Right-handed alpha
Helix 59
59
B
656 664Right-handed alpha
Helix 60
60
B
664 670Right-handed alpha
Helix 61
61
B
672 679Right-handed alpha
Helix 62
62
B
681 686Right-handed alpha
Helix 63
63
B
696 699Right-handed 310
Helix 64
64
B
700 720Right-handed alpha
Helix 65
65
B
720 729Right-handed alpha
Helix 66
66
B
751 755Right-handed 310
Helix 67
67
B
773 807Right-handed alpha
Helix 68
68
B
808 832Right-handed alpha
Helix 69
69
B
855 862Right-handed alpha
Helix 70
70
B
890 909Right-handed alpha
Helix 71
71
B
942 957Right-handed alpha
Helix 72
72
B
973 991Right-handed alpha
Helix 73
73
B
1002 1007Right-handed alpha
Helix 74
74
B
1007 1012Right-handed alpha
Helix 75
75
B
1060 1065Right-handed alpha
Helix 76
76
B
1070 1103Right-handed alpha
Helix 77
77
B
1106 1120Right-handed alpha
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There are 12 sheets in PDB entry 3THY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
65 67first strand
Strand 2
A
74 81anti-parallel
Strand 3
A
42 46anti-parallel
Strand 4
A
33 38anti-parallel
Strand 5
A
99 105parallel
Strand 6
A
117 123anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
148 152first strand
Strand 2
A
160 167anti-parallel
Strand 3
A
172 179anti-parallel
Strand 4
A
290 293parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 202first strand
Strand 2
A
223 227parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
301 302first strand
Strand 2
A
707 711parallel
Strand 3
A
744 748parallel
Strand 4
A
777 781parallel
Strand 5
A
664 668parallel
Strand 6
A
799 807parallel
Strand 7
A
810 819anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
512 516first strand
Strand 2
A
520 524anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 544first strand
Strand 2
A
549 552anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
623 625first strand
Strand 2
A
699 703parallel
Strand 3
A
632 637anti-parallel
Strand 4
A
653 657anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
266 268first strand
Strand 2
B
271 277anti-parallel
Strand 3
B
246 250anti-parallel
Strand 4
B
238 243anti-parallel
Strand 5
B
295 300parallel
Strand 6
B
319 325anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
445 449first strand
Strand 2
B
416 420parallel
Strand 3
B
359 365parallel
Strand 4
B
378 384anti-parallel
Strand 5
B
391 397anti-parallel
Strand 6
B
516 518parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
527 528first strand
Strand 2
B
925 929parallel
Strand 3
B
962 966parallel
Strand 4
B
995 999parallel
Strand 5
B
882 886parallel
Strand 6
B
1016 1025parallel
Strand 7
B
1045 1052anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
735 738first strand
Strand 2
B
741 748anti-parallel
Strand 3
B
768 772anti-parallel
Strand 4
B
760 764anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
841 843first strand
Strand 2
B
917 921parallel
Strand 3
B
847 853anti-parallel
Strand 4
B
871 875anti-parallel
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