Analysis of interatomic Contacts of Structural Units in PDB entry:
3V2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V2W entry

There is 1 chain in PDB entry 3V2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 17ILE 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3V2W. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
22 33Right-handed alpha
Helix 2
2
A
48 73Right-handed alpha
Helix 3
3
A
74 77Right-handed 310
Helix 4
4
A
78 104Right-handed alpha
Helix 5
5
A
107 112Right-handed 310
Helix 6
6
A
113 147Right-handed alpha
Helix 7
7
A
159 177Right-handed alpha
Helix 8
8
A
187 191Right-handed 310
Helix 9
9
A
199 1011Right-handed alpha
Helix 10
10
A
1038 1050Right-handed alpha
Helix 11
11
A
1059 1077Right-handed alpha
Helix 12
12
A
1084 1091Right-handed alpha
Helix 13
13
A
1092 1104Right-handed alpha
Helix 14
14
A
1107 1113Right-handed alpha
Helix 15
15
A
1114 1123Right-handed alpha
Helix 16
16
A
1125 1136Right-handed alpha
Helix 17
17
A
1137 1142Right-handed alpha
Helix 18
18
A
1142 1156Right-handed alpha
Helix 19
19
A
249 281Right-handed alpha
Helix 20
20
A
288 292Right-handed 310
Helix 21
21
A
293 303Right-handed alpha
Helix 22
22
A
305 315Right-handed alpha
Helix 23
23
A
315 324Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3V2W.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1018 1019first strand
Strand 2
A
1025 1027anti-parallel
Strand 3
A
1031 1034anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il