Analysis of interatomic Contacts of Structural Units in PDB entry:
3V32


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V32 entry

There are 2 chains in PDB entry 3V32 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 134PRO 296
A
 ASP 134PRO 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3V32. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
142 150Right-handed alpha
Helix 2
2
B
157 170Right-handed alpha
Helix 3
3
B
182 185Right-handed 310
Helix 4
4
B
196 205Right-handed alpha
Helix 5
5
B
224 236Right-handed alpha
Helix 6
6
B
246 253Right-handed alpha
Helix 7
7
B
253 263Right-handed alpha
Helix 8
8
B
287 292Right-handed alpha
Helix 9
9
A
142 150Right-handed alpha
Helix 10
10
A
157 170Right-handed alpha
Helix 11
11
A
182 185Right-handed 310
Helix 12
12
A
197 205Right-handed alpha
Helix 13
13
A
224 236Right-handed alpha
Helix 14
14
A
246 253Right-handed alpha
Helix 15
15
A
253 263Right-handed alpha
Helix 16
16
A
287 292Right-handed alpha
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There are 6 sheets in PDB entry 3V32. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 211first strand
Strand 2
B
175 180parallel
Strand 3
B
138 141parallel
Strand 4
B
239 241parallel
Strand 5
B
264 265parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
193 194parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 270first strand
Strand 2
B
273 275anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
175 180parallel
Strand 3
A
138 141parallel
Strand 4
A
239 241parallel
Strand 5
A
264 265parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
193 194parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 270first strand
Strand 2
A
273 275anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il