Analysis of interatomic Contacts of Structural Units in PDB entry:
3V3K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V3K entry

There are 16 chains in PDB entry 3V3K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 141SER 403
B
THR 25GLY 189
C
ASN 148SER 403
D
PRO 26GLY 189
E
GLU 143SER 403
F
THR 25GLY 189
G
ASN 148SER 403
H
THR 25GLY 189
I
ALA 141SER 403
J
THR 25GLY 189
K
ASN 148SER 403
L
THR 25GLY 189
M
ALA 141SER 403
N
THR 25GLY 189
O
ASN 148SER 403
P
THR 25GLY 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 97 helices in PDB entry 3V3K. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
181 196Right-handed alpha
Helix 2
2
A
207 220Right-handed alpha
Helix 3
3
A
258 264Right-handed alpha
Helix 4
4
A
270 274Right-handed 310
Helix 5
5
A
348 361Right-handed alpha
Helix 6
6
A
365 379Right-handed alpha
Helix 7
7
B
33 37Right-handed 310
Helix 8
8
B
39 56Right-handed alpha
Helix 9
9
B
62 83Right-handed alpha
Helix 10
10
B
103 128Right-handed alpha
Helix 11
11
B
136 142Right-handed alpha
Helix 12
12
B
148 162Right-handed alpha
Helix 13
13
C
181 196Right-handed alpha
Helix 14
14
C
207 221Right-handed alpha
Helix 15
15
C
258 264Right-handed alpha
Helix 16
16
C
270 274Right-handed 310
Helix 17
17
C
348 361Right-handed alpha
Helix 18
18
C
365 379Right-handed alpha
Helix 19
19
D
33 37Right-handed 310
Helix 20
20
D
39 56Right-handed alpha
Helix 21
21
D
62 83Right-handed alpha
Helix 22
22
D
103 128Right-handed alpha
Helix 23
23
D
136 142Right-handed alpha
Helix 24
24
D
148 163Right-handed alpha
Helix 25
25
E
181 196Right-handed alpha
Helix 26
26
E
207 220Right-handed alpha
Helix 27
27
E
258 263Right-handed alpha
Helix 28
28
E
270 274Right-handed 310
Helix 29
29
E
348 361Right-handed alpha
Helix 30
30
E
365 379Right-handed alpha
Helix 31
31
F
33 37Right-handed 310
Helix 32
32
F
39 56Right-handed alpha
Helix 33
33
F
62 83Right-handed alpha
Helix 34
34
F
103 128Right-handed alpha
Helix 35
35
F
136 142Right-handed alpha
Helix 36
36
F
148 162Right-handed alpha
Helix 37
37
G
181 196Right-handed alpha
Helix 38
38
G
207 221Right-handed alpha
Helix 39
39
G
258 265Right-handed alpha
Helix 40
40
G
270 274Right-handed 310
Helix 41
41
G
348 361Right-handed alpha
Helix 42
42
G
365 379Right-handed alpha
Helix 43
43
H
33 37Right-handed 310
Helix 44
44
H
39 56Right-handed alpha
Helix 45
45
H
62 83Right-handed alpha
Helix 46
46
H
103 128Right-handed alpha
Helix 47
47
H
138 143Right-handed alpha
Helix 48
48
H
148 162Right-handed alpha
Helix 49
49
I
142 147Right-handed alpha
Helix 50
50
I
181 196Right-handed alpha
Helix 51
51
I
207 221Right-handed alpha
Helix 52
52
I
258 264Right-handed alpha
Helix 53
53
I
270 274Right-handed 310
Helix 54
54
I
348 361Right-handed alpha
Helix 55
55
I
365 379Right-handed alpha
Helix 56
56
J
33 37Right-handed 310
Helix 57
57
J
39 56Right-handed alpha
Helix 58
58
J
62 83Right-handed alpha
Helix 59
59
J
103 128Right-handed alpha
Helix 60
60
J
136 142Right-handed alpha
Helix 61
61
J
148 162Right-handed alpha
Helix 62
62
K
181 196Right-handed alpha
Helix 63
63
K
207 221Right-handed alpha
Helix 64
64
K
258 264Right-handed alpha
Helix 65
65
K
270 274Right-handed 310
Helix 66
66
K
348 361Right-handed alpha
Helix 67
67
K
365 379Right-handed alpha
Helix 68
68
L
33 37Right-handed 310
Helix 69
69
L
39 56Right-handed alpha
Helix 70
70
L
62 83Right-handed alpha
Helix 71
71
L
103 128Right-handed alpha
Helix 72
72
L
136 143Right-handed alpha
Helix 73
73
L
148 163Right-handed alpha
Helix 74
74
M
142 147Right-handed alpha
Helix 75
75
M
181 196Right-handed alpha
Helix 76
76
M
207 221Right-handed alpha
Helix 77
77
M
258 264Right-handed alpha
Helix 78
78
M
270 274Right-handed 310
Helix 79
79
M
348 361Right-handed alpha
Helix 80
80
M
365 379Right-handed alpha
Helix 81
81
N
33 37Right-handed 310
Helix 82
82
N
39 56Right-handed alpha
Helix 83
83
N
62 83Right-handed alpha
Helix 84
84
N
103 128Right-handed alpha
Helix 85
85
N
148 162Right-handed alpha
Helix 86
86
O
181 196Right-handed alpha
Helix 87
87
O
207 221Right-handed alpha
Helix 88
88
O
258 264Right-handed alpha
Helix 89
89
O
270 274Right-handed 310
Helix 90
90
O
348 361Right-handed alpha
Helix 91
91
O
365 379Right-handed alpha
Helix 92
92
P
33 37Right-handed 310
Helix 93
93
P
39 56Right-handed alpha
Helix 94
94
P
62 83Right-handed alpha
Helix 95
95
P
103 128Right-handed alpha
Helix 96
96
P
136 143Right-handed alpha
Helix 97
97
P
148 162Right-handed alpha
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There are 33 sheets in PDB entry 3V3K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
198 204first strand
Strand 2
A
163 169parallel
Strand 3
A
230 235parallel
Strand 4
A
278 283parallel
Strand 5
A
327 331parallel
Strand 6
A
388 392anti-parallel
Strand 7
C
388 393anti-parallel
Strand 8
C
327 331anti-parallel
Strand 9
C
278 283parallel
Strand 10
C
229 235parallel
Strand 11
C
163 169parallel
Strand 12
C
198 204parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
238 239first strand
Strand 2
A
242 244anti-parallel
Strand 3
A
255 257anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
294 295first strand
Strand 2
C
320 321anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
346 347first strand
Strand 2
A
340 342anti-parallel
Strand 3
B
187 188anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
84 87first strand
Strand 2
B
95 98anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
238 239first strand
Strand 2
C
242 244anti-parallel
Strand 3
C
255 257anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
346 347first strand
Strand 2
C
340 342anti-parallel
Strand 3
D
187 188anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
84 87first strand
Strand 2
D
95 98anti-parallel
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There are 12 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
198 204first strand
Strand 2
E
163 169parallel
Strand 3
E
230 235parallel
Strand 4
E
278 283parallel
Strand 5
E
327 331parallel
Strand 6
E
388 393anti-parallel
Strand 7
G
388 393anti-parallel
Strand 8
G
327 331anti-parallel
Strand 9
G
278 283parallel
Strand 10
G
230 235parallel
Strand 11
G
163 169parallel
Strand 12
G
198 204parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
242 244first strand
Strand 2
E
255 257anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
294 295first strand
Strand 2
G
320 321anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
320 321first strand
Strand 2
G
294 295anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
346 347first strand
Strand 2
E
340 342anti-parallel
Strand 3
F
187 188anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
84 87first strand
Strand 2
F
95 98anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
238 239first strand
Strand 2
G
242 244anti-parallel
Strand 3
G
255 257anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
346 347first strand
Strand 2
G
340 342anti-parallel
Strand 3
H
187 188anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
84 87first strand
Strand 2
H
95 98anti-parallel
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There are 12 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
198 204first strand
Strand 2
I
163 169parallel
Strand 3
I
230 235parallel
Strand 4
I
278 283parallel
Strand 5
I
327 331parallel
Strand 6
I
388 393anti-parallel
Strand 7
K
388 393anti-parallel
Strand 8
K
327 331anti-parallel
Strand 9
K
278 283parallel
Strand 10
K
229 235parallel
Strand 11
K
163 169parallel
Strand 12
K
198 204parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
238 239first strand
Strand 2
I
242 244anti-parallel
Strand 3
I
255 257anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
294 295first strand
Strand 2
K
320 321anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
346 347first strand
Strand 2
I
340 342anti-parallel
Strand 3
J
187 188anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
84 87first strand
Strand 2
J
95 98anti-parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
238 239first strand
Strand 2
K
242 244anti-parallel
Strand 3
K
255 257anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
346 347first strand
Strand 2
K
340 342anti-parallel
Strand 3
L
187 188anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
84 87first strand
Strand 2
L
95 98anti-parallel
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There are 12 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
198 204first strand
Strand 2
M
163 169parallel
Strand 3
M
230 235parallel
Strand 4
M
278 283parallel
Strand 5
M
327 331parallel
Strand 6
M
389 393anti-parallel
Strand 7
O
388 393anti-parallel
Strand 8
O
327 331anti-parallel
Strand 9
O
278 283parallel
Strand 10
O
229 235parallel
Strand 11
O
163 169parallel
Strand 12
O
198 204parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
238 239first strand
Strand 2
M
242 244anti-parallel
Strand 3
M
255 257anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
294 295first strand
Strand 2
O
320 321anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
346 347first strand
Strand 2
M
340 342anti-parallel
Strand 3
N
187 188anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
84 87first strand
Strand 2
N
95 98anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
238 239first strand
Strand 2
O
242 244anti-parallel
Strand 3
O
255 257anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
346 347first strand
Strand 2
O
340 342anti-parallel
Strand 3
P
187 188anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
84 87first strand
Strand 2
P
95 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il