Analysis of interatomic Contacts of Structural Units in PDB entry:
3V4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V4V entry

There are 4 chains in PDB entry 3V4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 1ARG 587
B
ARG 81CYS 455
H
GLN 1ILE 218
L
ASP 1GLU 128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3V4V. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
140 144Right-handed 310
Helix 2
2
A
184 189Right-handed alpha
Helix 3
3
A
241 245Right-handed 310
Helix 4
4
A
359 364Right-handed alpha
Helix 5
5
A
388 390Right-handed 310
Helix 6
6
A
454 458Right-handed 310
Helix 7
7
B
142 144Right-handed 310
Helix 8
8
B
145 155Right-handed alpha
Helix 9
9
B
156 164Right-handed alpha
Helix 10
10
B
189 195Right-handed alpha
Helix 11
11
B
220 228Right-handed alpha
Helix 12
12
B
241 252Right-handed alpha
Helix 13
13
B
252 257Right-handed alpha
Helix 14
14
B
277 281Right-handed 310
Helix 15
15
B
300 306Right-handed 310
Helix 16
16
B
310 321Right-handed alpha
Helix 17
17
B
333 342Right-handed alpha
Helix 18
18
B
358 372Right-handed alpha
Helix 19
38
H
28 32Right-handed 310
Helix 20
39
H
87 91Right-handed 310
Helix 21
42
L
126 131Right-handed alpha
Helix 22
43
L
187 193Right-handed alpha
Helix 23
19
C
140 144Right-handed 310
Helix 24
20
C
184 189Right-handed alpha
Helix 25
21
C
241 245Right-handed 310
Helix 26
22
C
359 364Right-handed alpha
Helix 27
23
C
388 390Right-handed 310
Helix 28
24
C
454 458Right-handed 310
Helix 29
25
C
572 575Right-handed 310
Helix 30
26
D
142 144Right-handed 310
Helix 31
27
D
145 155Right-handed alpha
Helix 32
28
D
156 164Right-handed alpha
Helix 33
29
D
189 195Right-handed alpha
Helix 34
30
D
220 228Right-handed alpha
Helix 35
31
D
241 252Right-handed alpha
Helix 36
32
D
252 257Right-handed alpha
Helix 37
33
D
277 281Right-handed 310
Helix 38
34
D
300 306Right-handed 310
Helix 39
35
D
310 322Right-handed alpha
Helix 40
36
D
333 342Right-handed alpha
Helix 41
37
D
358 372Right-handed alpha
Helix 42
40
M
28 32Right-handed 310
Helix 43
41
M
87 91Right-handed 310
Helix 44
44
N
126 131Right-handed alpha
Helix 45
45
N
187 193Right-handed alpha
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There are 55 sheets in PDB entry 3V4V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
9 12first strand
Strand 2
A
424 428anti-parallel
Strand 3
A
414 419anti-parallel
Strand 4
A
397 405anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
23 28first strand
Strand 2
A
31 38anti-parallel
Strand 3
A
54 59anti-parallel
Strand 4
A
69 71anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 88first strand
Strand 2
A
116 117anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
94 100first strand
Strand 2
A
108 112anti-parallel
Strand 3
A
132 135anti-parallel
Strand 4
A
145 147anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
171 173first strand
Strand 2
A
177 182anti-parallel
Strand 3
A
191 196anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 225first strand
Strand 2
A
234 239anti-parallel
Strand 3
A
247 253anti-parallel
Strand 4
A
258 265anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
277 280first strand
Strand 2
A
289 294anti-parallel
Strand 3
A
305 311anti-parallel
Strand 4
A
318 319anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
339 340first strand
Strand 2
A
353 357anti-parallel
Strand 3
A
366 370anti-parallel
Strand 4
A
383 386anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
372 373first strand
Strand 2
A
376 377anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
500 501first strand
Strand 2
A
523 531anti-parallel
Strand 3
A
462 472anti-parallel
Strand 4
A
433 441anti-parallel
Strand 5
A
569 570parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
510 518first strand
Strand 2
A
479 487anti-parallel
Strand 3
A
542 550anti-parallel
Strand 4
A
578 583anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
83 86first strand
Strand 2
B
108 112anti-parallel
Strand 3
B
446 450parallel
Strand 4
B
435 441anti-parallel
Strand 5
B
374 377anti-parallel
Strand 6
B
407 409anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
104 105first strand
Strand 2
B
119 126anti-parallel
Strand 3
B
417 426anti-parallel
Strand 4
B
385 388anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
104 105first strand
Strand 2
B
119 126anti-parallel
Strand 3
B
417 426anti-parallel
Strand 4
B
391 392anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
210 217first strand
Strand 2
B
170 177anti-parallel
Strand 3
B
133 140parallel
Strand 4
B
262 269parallel
Strand 5
B
323 329parallel
Strand 6
B
348 351parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
9 12first strand
Strand 2
C
424 428anti-parallel
Strand 3
C
414 419anti-parallel
Strand 4
C
397 405anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
23 28first strand
Strand 2
C
31 38anti-parallel
Strand 3
C
54 59anti-parallel
Strand 4
C
69 71anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
87 88first strand
Strand 2
C
116 117anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
94 100first strand
Strand 2
C
108 112anti-parallel
Strand 3
C
132 135anti-parallel
Strand 4
C
145 147anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
171 173first strand
Strand 2
C
177 182anti-parallel
Strand 3
C
191 196anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
222 225first strand
Strand 2
C
234 239anti-parallel
Strand 3
C
247 253anti-parallel
Strand 4
C
258 265anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
277 280first strand
Strand 2
C
289 294anti-parallel
Strand 3
C
305 311anti-parallel
Strand 4
C
318 319anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
339 340first strand
Strand 2
C
353 357anti-parallel
Strand 3
C
366 370anti-parallel
Strand 4
C
383 386anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
372 373first strand
Strand 2
C
376 377anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
433 434first strand
Strand 2
C
569 570parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
436 441first strand
Strand 2
C
462 471anti-parallel
Strand 3
C
523 531anti-parallel
Strand 4
C
500 501anti-parallel
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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
445 446first strand
Strand 2
C
579 585parallel
Strand 3
C
542 550anti-parallel
Strand 4
C
479 487anti-parallel
Strand 5
C
510 518anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
83 86first strand
Strand 2
D
108 112anti-parallel
Strand 3
D
446 450parallel
Strand 4
D
435 441anti-parallel
Strand 5
D
374 377anti-parallel
Strand 6
D
407 409anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
104 105first strand
Strand 2
D
119 126anti-parallel
Strand 3
D
417 426anti-parallel
Strand 4
D
385 388anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
104 105first strand
Strand 2
D
119 126anti-parallel
Strand 3
D
417 426anti-parallel
Strand 4
D
391 392anti-parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
210 217first strand
Strand 2
D
170 177anti-parallel
Strand 3
D
133 140parallel
Strand 4
D
262 269parallel
Strand 5
D
323 329parallel
Strand 6
D
348 351parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 5first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
9 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
9 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
105 111anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
182 192anti-parallel
Strand 4
H
171 173anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
182 192anti-parallel
Strand 4
H
177 179anti-parallel
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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
159 161first strand
Strand 2
H
203 207anti-parallel
Strand 3
H
212 216anti-parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
3 5first strand
Strand 2
M
18 25anti-parallel
Strand 3
M
78 83anti-parallel
Strand 4
M
68 73anti-parallel
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There are 6 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
9 12first strand
Strand 2
M
115 119parallel
Strand 3
M
92 102anti-parallel
Strand 4
M
33 39anti-parallel
Strand 5
M
46 52anti-parallel
Strand 6
M
57 60anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
9 12first strand
Strand 2
M
115 119parallel
Strand 3
M
92 102anti-parallel
Strand 4
M
105 111anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
128 132first strand
Strand 2
M
143 153anti-parallel
Strand 3
M
182 192anti-parallel
Strand 4
M
171 173anti-parallel
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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
128 132first strand
Strand 2
M
143 153anti-parallel
Strand 3
M
182 192anti-parallel
Strand 4
M
177 179anti-parallel
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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
159 161first strand
Strand 2
M
203 207anti-parallel
Strand 3
M
212 216anti-parallel
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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
75 80anti-parallel
Strand 4
L
67 72anti-parallel
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There are 6 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 13first strand
Strand 2
L
107 111parallel
Strand 3
L
90 95anti-parallel
Strand 4
L
38 43anti-parallel
Strand 5
L
50 54anti-parallel
Strand 6
L
58 59anti-parallel
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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
10 13first strand
Strand 2
L
107 111parallel
Strand 3
L
90 95anti-parallel
Strand 4
L
102 103anti-parallel
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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
119 123first strand
Strand 2
L
136 144anti-parallel
Strand 3
L
178 185anti-parallel
Strand 4
L
164 168anti-parallel
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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
158 159first strand
Strand 2
L
151 155anti-parallel
Strand 3
L
196 201anti-parallel
Strand 4
L
210 211anti-parallel
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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
158 159first strand
Strand 2
L
151 155anti-parallel
Strand 3
L
196 201anti-parallel
Strand 4
L
214 215anti-parallel
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There are 4 strands in AX sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
4 7first strand
Strand 2
N
19 25anti-parallel
Strand 3
N
75 80anti-parallel
Strand 4
N
67 72anti-parallel
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There are 6 strands in AY sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
10 13first strand
Strand 2
N
107 111parallel
Strand 3
N
90 95anti-parallel
Strand 4
N
38 43anti-parallel
Strand 5
N
50 54anti-parallel
Strand 6
N
58 59anti-parallel
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There are 4 strands in AZ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
10 13first strand
Strand 2
N
107 111parallel
Strand 3
N
90 95anti-parallel
Strand 4
N
102 103anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
119 123first strand
Strand 2
N
136 144anti-parallel
Strand 3
N
178 185anti-parallel
Strand 4
N
164 168anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
158 159first strand
Strand 2
N
151 155anti-parallel
Strand 3
N
196 201anti-parallel
Strand 4
N
210 211anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
158 159first strand
Strand 2
N
151 155anti-parallel
Strand 3
N
196 201anti-parallel
Strand 4
N
214 215anti-parallel
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