Analysis of interatomic Contacts of Structural Units in PDB entry:
3V7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V7X entry

There is 1 chain in PDB entry 3V7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 1003LYS 1261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 3V7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1015 1019Right-handed 310
Helix 2
2
A
1020 1025Right-handed 310
Helix 3
3
A
1127 1129Right-handed 310
Helix 4
4
A
1130 1135Right-handed alpha
Helix 5
5
A
1154 1156Right-handed 310
Helix 6
6
A
1157 1164Right-handed alpha
Helix 7
7
A
1165 1167Right-handed 310
Helix 8
8
A
1180 1185Right-handed 310
Helix 9
9
A
1219 1227Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3V7X. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1032 1033first strand
Strand 2
A
1108 1109parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1039 1040first strand
Strand 2
A
1257 1258parallel
Strand 3
A
1191 1196anti-parallel
Strand 4
A
1207 1212anti-parallel
Strand 5
A
1141 1150parallel
Strand 6
A
1116 1124anti-parallel
Strand 7
A
1088 1097anti-parallel
Strand 8
A
1066 1070anti-parallel
Strand 9
A
1056 1061anti-parallel
Strand 10
A
1173 1175anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1045 1050first strand
Strand 2
A
1078 1082anti-parallel
Strand 3
A
1088 1097anti-parallel
Strand 4
A
1116 1124anti-parallel
Strand 5
A
1141 1150anti-parallel
Strand 6
A
1216 1218parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il