Analysis of interatomic Contacts of Structural Units in PDB entry:
3W1J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3W1J entry

There are 7 chains in PDB entry 3W1J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 61	ASP 284
A	LEU 286	ILE 452
B	SER 63	ASP 284
B	LEU 286	ILE 452
C	MET 61	ASP 284
C	LEU 286	ILE 452
D	SER 63	ILE 161

There are173 helices in PDB entry 3W1J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	81	85	Right-handed 310
Helix 2	2	A	90	102	Right-handed alpha
Helix 3	3	A	120	132	Right-handed alpha
Helix 4	4	A	141	155	Right-handed alpha
Helix 5	5	A	175	183	Right-handed alpha
Helix 6	6	A	196	202	Right-handed alpha
Helix 7	7	A	229	241	Right-handed alpha
Helix 8	8	A	255	259	Right-handed 310
Helix 9	9	A	267	274	Right-handed alpha
Helix 10	10	A	298	307	Right-handed alpha
Helix 11	11	A	309	314	Right-handed alpha
Helix 12	12	A	317	333	Right-handed alpha
Helix 13	13	A	335	338	Right-handed 310
Helix 14	14	A	339	346	Right-handed alpha
Helix 15	15	A	348	364	Right-handed alpha
Helix 16	16	A	403	413	Right-handed alpha
Helix 17	17	A	432	434	Right-handed 310
Helix 18	18	A	435	451	Right-handed alpha
Helix 19	19	B	90	102	Right-handed alpha
Helix 20	20	B	120	132	Right-handed alpha
Helix 21	21	B	141	155	Right-handed alpha
Helix 22	22	B	175	183	Right-handed alpha
Helix 23	23	B	196	202	Right-handed alpha
Helix 24	24	B	229	241	Right-handed alpha
Helix 25	25	B	255	259	Right-handed 310
Helix 26	26	B	267	273	Right-handed alpha
Helix 27	27	B	298	308	Right-handed alpha
Helix 28	28	B	309	313	Right-handed 310
Helix 29	29	B	317	333	Right-handed alpha
Helix 30	30	B	335	338	Right-handed 310
Helix 31	31	B	339	347	Right-handed alpha
Helix 32	32	B	348	364	Right-handed alpha
Helix 33	33	B	403	413	Right-handed alpha
Helix 34	34	B	432	434	Right-handed 310
Helix 35	35	B	435	451	Right-handed alpha
Helix 36	36	C	62	66	Right-handed 310
Helix 37	37	C	90	103	Right-handed alpha
Helix 38	38	C	120	132	Right-handed alpha
Helix 39	39	C	141	154	Right-handed alpha
Helix 40	40	C	175	183	Right-handed alpha
Helix 41	41	C	196	202	Right-handed alpha
Helix 42	42	C	229	241	Right-handed alpha
Helix 43	43	C	267	273	Right-handed alpha
Helix 44	44	C	298	308	Right-handed alpha
Helix 45	45	C	309	313	Right-handed 310
Helix 46	46	C	317	333	Right-handed alpha
Helix 47	47	C	335	338	Right-handed 310
Helix 48	48	C	339	347	Right-handed alpha
Helix 49	49	C	348	364	Right-handed alpha
Helix 50	50	C	403	413	Right-handed alpha
Helix 51	51	C	432	434	Right-handed 310
Helix 52	52	C	435	451	Right-handed alpha
Helix 53	53	D	90	102	Right-handed alpha
Helix 54	54	D	119	132	Right-handed alpha
Helix 55	55	D	141	155	Right-handed alpha
Helix 56	56	D	174	183	Right-handed alpha
Helix 57	57	D	196	203	Right-handed alpha
Helix 58	58	D	229	241	Right-handed alpha
Helix 59	59	D	255	259	Right-handed 310
Helix 60	60	D	267	274	Right-handed alpha
Helix 61	61	D	298	308	Right-handed alpha
Helix 62	62	D	309	313	Right-handed 310
Helix 63	63	D	317	333	Right-handed alpha
Helix 64	64	D	335	338	Right-handed 310
Helix 65	65	D	339	347	Right-handed alpha
Helix 66	66	D	348	364	Right-handed alpha
Helix 67	67	D	403	413	Right-handed alpha
Helix 68	68	D	435	451	Right-handed alpha
Helix 69	69	E	90	102	Right-handed alpha
Helix 70	70	E	120	132	Right-handed alpha
Helix 71	71	E	141	155	Right-handed alpha
Helix 72	72	E	175	183	Right-handed alpha
Helix 73	73	E	196	203	Right-handed alpha
Helix 74	74	E	229	241	Right-handed alpha
Helix 75	75	E	255	260	Right-handed 310
Helix 76	76	E	267	275	Right-handed alpha
Helix 77	77	E	298	308	Right-handed alpha
Helix 78	78	E	309	314	Right-handed alpha
Helix 79	79	E	317	333	Right-handed alpha
Helix 80	80	E	335	338	Right-handed 310
Helix 81	81	E	339	347	Right-handed alpha
Helix 82	82	E	348	364	Right-handed alpha
Helix 83	83	E	403	413	Right-handed alpha
Helix 84	84	E	432	434	Right-handed 310
Helix 85	85	E	435	451	Right-handed alpha
Helix 86	86	F	62	66	Right-handed 310
Helix 87	87	F	81	85	Right-handed 310
Helix 88	88	F	90	102	Right-handed alpha
Helix 89	89	F	120	132	Right-handed alpha
Helix 90	90	F	141	155	Right-handed alpha
Helix 91	91	F	175	183	Right-handed alpha
Helix 92	92	F	196	203	Right-handed alpha
Helix 93	93	F	229	241	Right-handed alpha
Helix 94	94	F	255	260	Right-handed 310
Helix 95	95	F	267	274	Right-handed alpha
Helix 96	96	F	298	307	Right-handed alpha
Helix 97	97	F	308	314	Right-handed alpha
Helix 98	98	F	317	333	Right-handed alpha
Helix 99	99	F	335	338	Right-handed 310
Helix 100	100	F	339	347	Right-handed alpha
Helix 101	101	F	348	364	Right-handed alpha
Helix 102	102	F	403	413	Right-handed alpha
Helix 103	103	F	432	434	Right-handed 310
Helix 104	104	F	435	451	Right-handed alpha
Helix 105	105	G	90	103	Right-handed alpha
Helix 106	106	G	120	132	Right-handed alpha
Helix 107	107	G	141	155	Right-handed alpha
Helix 108	108	G	164	166	Right-handed 310
Helix 109	109	G	175	183	Right-handed alpha
Helix 110	110	G	196	203	Right-handed alpha
Helix 111	111	G	229	241	Right-handed alpha
Helix 112	112	G	255	259	Right-handed 310
Helix 113	113	G	267	274	Right-handed alpha
Helix 114	114	G	298	308	Right-handed alpha
Helix 115	115	G	309	314	Right-handed alpha
Helix 116	116	G	317	333	Right-handed alpha
Helix 117	117	G	335	338	Right-handed 310
Helix 118	118	G	339	347	Right-handed alpha
Helix 119	119	G	348	364	Right-handed alpha
Helix 120	120	G	403	413	Right-handed alpha
Helix 121	121	G	432	434	Right-handed 310
Helix 122	122	G	435	451	Right-handed alpha
Helix 123	123	H	90	102	Right-handed alpha
Helix 124	124	H	120	132	Right-handed alpha
Helix 125	125	H	141	155	Right-handed alpha
Helix 126	126	H	175	183	Right-handed alpha
Helix 127	127	H	196	203	Right-handed alpha
Helix 128	128	H	229	241	Right-handed alpha
Helix 129	129	H	255	259	Right-handed 310
Helix 130	130	H	267	274	Right-handed alpha
Helix 131	131	H	298	308	Right-handed alpha
Helix 132	132	H	309	314	Right-handed alpha
Helix 133	133	H	317	333	Right-handed alpha
Helix 134	134	H	335	338	Right-handed 310
Helix 135	135	H	339	346	Right-handed alpha
Helix 136	136	H	348	364	Right-handed alpha
Helix 137	137	H	403	413	Right-handed alpha
Helix 138	138	H	435	451	Right-handed alpha
Helix 139	139	I	81	85	Right-handed 310
Helix 140	140	I	90	103	Right-handed alpha
Helix 141	141	I	120	132	Right-handed alpha
Helix 142	142	I	141	155	Right-handed alpha
Helix 143	143	I	164	166	Right-handed 310
Helix 144	144	I	175	183	Right-handed alpha
Helix 145	145	I	196	203	Right-handed alpha
Helix 146	146	I	229	241	Right-handed alpha
Helix 147	147	I	255	259	Right-handed 310
Helix 148	148	I	267	274	Right-handed alpha
Helix 149	149	I	298	307	Right-handed alpha
Helix 150	150	I	309	314	Right-handed alpha
Helix 151	151	I	317	333	Right-handed alpha
Helix 152	152	I	335	338	Right-handed 310
Helix 153	153	I	339	347	Right-handed alpha
Helix 154	154	I	348	364	Right-handed alpha
Helix 155	155	I	403	413	Right-handed alpha
Helix 156	156	I	435	451	Right-handed alpha
Helix 157	157	J	61	65	Right-handed 310
Helix 158	158	J	90	103	Right-handed alpha
Helix 159	159	J	120	132	Right-handed alpha
Helix 160	160	J	141	154	Right-handed alpha
Helix 161	161	J	175	183	Right-handed alpha
Helix 162	162	J	196	203	Right-handed alpha
Helix 163	163	J	229	241	Right-handed alpha
Helix 164	164	J	255	260	Right-handed 310
Helix 165	165	J	267	274	Right-handed alpha
Helix 166	166	J	298	307	Right-handed alpha
Helix 167	167	J	308	314	Right-handed alpha
Helix 168	168	J	317	333	Right-handed alpha
Helix 169	169	J	335	338	Right-handed 310
Helix 170	170	J	339	347	Right-handed alpha
Helix 171	171	J	348	364	Right-handed alpha
Helix 172	172	J	403	413	Right-handed alpha
Helix 173	173	J	435	451	Right-handed alpha

There are 45 sheets in PDB entry 3W1J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	73	74	first strand
Strand 2	A	418	419	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	110	first strand
Strand 2	A	115	116	anti-parallel

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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	139	first strand
Strand 2	A	293	297	anti-parallel
Strand 3	A	278	281	anti-parallel
Strand 4	A	244	249	parallel
Strand 5	A	208	214	parallel
Strand 6	A	158	162	parallel
Strand 7	A	185	189	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	169	first strand
Strand 2	A	173	174	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	223	first strand
Strand 2	J	219	223	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	378	first strand
Strand 2	A	390	399	anti-parallel
Strand 3	A	426	430	anti-parallel
Strand 4	A	421	423	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	75	first strand
Strand 2	B	418	423	parallel
Strand 3	B	426	430	anti-parallel
Strand 4	B	390	399	anti-parallel
Strand 5	B	369	378	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	110	first strand
Strand 2	B	115	116	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	139	first strand
Strand 2	B	293	297	anti-parallel
Strand 3	B	278	281	anti-parallel
Strand 4	B	244	249	parallel
Strand 5	B	208	214	parallel
Strand 6	B	158	162	parallel
Strand 7	B	185	189	parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	169	first strand
Strand 2	B	173	174	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	223	first strand
Strand 2	C	219	223	anti-parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	73	75	first strand
Strand 2	C	418	423	parallel
Strand 3	C	426	430	anti-parallel
Strand 4	C	390	399	anti-parallel
Strand 5	C	369	378	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	109	110	first strand
Strand 2	C	115	116	anti-parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	139	first strand
Strand 2	C	293	297	anti-parallel
Strand 3	C	278	280	anti-parallel
Strand 4	C	244	247	parallel
Strand 5	C	208	214	parallel
Strand 6	C	158	162	parallel
Strand 7	C	185	189	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	169	first strand
Strand 2	C	173	174	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	73	75	first strand
Strand 2	D	418	420	parallel

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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	293	297	anti-parallel
Strand 3	D	278	282	anti-parallel
Strand 4	D	244	249	parallel
Strand 5	D	208	214	parallel
Strand 6	D	158	162	parallel
Strand 7	D	185	189	parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	223	first strand
Strand 2	E	219	223	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	369	378	first strand
Strand 2	D	390	399	anti-parallel
Strand 3	D	426	430	anti-parallel
Strand 4	D	422	423	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	73	75	first strand
Strand 2	E	418	423	parallel
Strand 3	E	426	430	anti-parallel
Strand 4	E	390	399	anti-parallel
Strand 5	E	369	378	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	109	110	first strand
Strand 2	E	115	116	anti-parallel

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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	139	first strand
Strand 2	E	293	297	anti-parallel
Strand 3	E	278	282	anti-parallel
Strand 4	E	244	249	parallel
Strand 5	E	208	214	parallel
Strand 6	E	158	162	parallel
Strand 7	E	185	189	parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	169	first strand
Strand 2	E	173	174	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	73	75	first strand
Strand 2	F	418	423	parallel
Strand 3	F	426	430	anti-parallel
Strand 4	F	390	399	anti-parallel
Strand 5	F	369	378	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	109	110	first strand
Strand 2	F	115	116	anti-parallel

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There are 7 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	135	139	first strand
Strand 2	F	293	297	anti-parallel
Strand 3	F	278	282	anti-parallel
Strand 4	F	244	249	parallel
Strand 5	F	208	214	parallel
Strand 6	F	158	162	parallel
Strand 7	F	185	189	parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	168	169	first strand
Strand 2	F	173	174	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	219	223	first strand
Strand 2	G	219	223	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	73	74	first strand
Strand 2	G	418	419	parallel

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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	139	first strand
Strand 2	G	293	297	anti-parallel
Strand 3	G	278	282	anti-parallel
Strand 4	G	244	249	parallel
Strand 5	G	208	214	parallel
Strand 6	G	158	162	parallel
Strand 7	G	185	189	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	168	169	first strand
Strand 2	G	173	174	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	369	378	first strand
Strand 2	G	390	399	anti-parallel
Strand 3	G	426	430	anti-parallel
Strand 4	G	422	423	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	73	75	first strand
Strand 2	H	418	423	parallel
Strand 3	H	426	430	anti-parallel
Strand 4	H	390	399	anti-parallel
Strand 5	H	369	378	anti-parallel

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There are 7 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	293	297	anti-parallel
Strand 3	H	278	282	anti-parallel
Strand 4	H	244	249	parallel
Strand 5	H	208	214	parallel
Strand 6	H	158	162	parallel
Strand 7	H	185	189	parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	168	169	first strand
Strand 2	H	173	174	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	219	223	first strand
Strand 2	I	219	223	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	73	75	first strand
Strand 2	I	418	423	parallel
Strand 3	I	426	430	anti-parallel
Strand 4	I	390	399	anti-parallel
Strand 5	I	369	378	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	109	110	first strand
Strand 2	I	115	116	anti-parallel

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There are 7 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	135	139	first strand
Strand 2	I	293	297	anti-parallel
Strand 3	I	278	282	anti-parallel
Strand 4	I	244	249	parallel
Strand 5	I	208	214	parallel
Strand 6	I	158	162	parallel
Strand 7	I	185	189	parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	168	169	first strand
Strand 2	I	173	174	anti-parallel

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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	73	75	first strand
Strand 2	J	418	423	parallel
Strand 3	J	426	428	anti-parallel

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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	109	110	first strand
Strand 2	J	115	116	anti-parallel

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There are 7 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	135	139	first strand
Strand 2	J	293	297	anti-parallel
Strand 3	J	278	282	anti-parallel
Strand 4	J	244	249	parallel
Strand 5	J	208	214	parallel
Strand 6	J	158	162	parallel
Strand 7	J	185	189	parallel

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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	168	169	first strand
Strand 2	J	173	174	anti-parallel

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There are 2 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	369	378	first strand
Strand 2	J	390	399	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 3W1J

Analysis of interatomic Contacts of Structural Units in PDB entry:
3W1J