Analysis of interatomic Contacts of Structural Units in PDB entry:
3W6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3W6O entry

There are 2 chains in PDB entry 3W6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1TRP 736
B
 GLY -1TRP 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3W6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 19Right-handed alpha
Helix 2
2
A
37 45Right-handed alpha
Helix 3
3
A
103 120Right-handed alpha
Helix 4
4
A
161 175Right-handed alpha
Helix 5
5
A
190 193Right-handed 310
Helix 6
6
A
194 204Right-handed alpha
Helix 7
7
A
216 220Right-handed 310
Helix 8
8
A
226 231Right-handed alpha
Helix 9
9
A
248 254Right-handed alpha
Helix 10
10
A
257 273Right-handed alpha
Helix 11
11
A
276 280Right-handed 310
Helix 12
12
A
281 318Right-handed alpha
Helix 13
13
A
713 732Right-handed alpha
Helix 14
14
B
4 19Right-handed alpha
Helix 15
15
B
37 45Right-handed alpha
Helix 16
16
B
71 75Right-handed 310
Helix 17
17
B
95 97Right-handed 310
Helix 18
18
B
103 120Right-handed alpha
Helix 19
19
B
161 175Right-handed alpha
Helix 20
20
B
190 193Right-handed 310
Helix 21
21
B
194 204Right-handed alpha
Helix 22
22
B
216 220Right-handed 310
Helix 23
23
B
226 231Right-handed alpha
Helix 24
24
B
248 254Right-handed alpha
Helix 25
25
B
257 273Right-handed alpha
Helix 26
26
B
276 280Right-handed 310
Helix 27
27
B
281 319Right-handed alpha
Helix 28
28
B
710 732Right-handed alpha
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There are 2 sheets in PDB entry 3W6O. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 93first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
63 69parallel
Strand 4
A
142 146anti-parallel
Strand 5
A
27 31parallel
Strand 6
A
179 186parallel
Strand 7
A
210 215parallel
Strand 8
A
241 243parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 93first strand
Strand 2
B
130 136anti-parallel
Strand 3
B
63 69parallel
Strand 4
B
142 146anti-parallel
Strand 5
B
27 31parallel
Strand 6
B
179 186parallel
Strand 7
B
210 215parallel
Strand 8
B
241 243parallel
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