Analysis of interatomic Contacts of Structural Units in PDB entry:
3WGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WGE entry

There is 1 chain in PDB entry 3WGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 186ARG 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3WGE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
198 204Right-handed alpha
Helix 2
2
A
217 234Right-handed alpha
Helix 3
3
A
250 256Right-handed alpha
Helix 4
4
A
282 293Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3WGE.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
191 193first strand
Strand 2
A
240 246parallel
Strand 3
A
207 213parallel
Strand 4
A
264 269anti-parallel
Strand 5
A
272 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il