Analysis of interatomic Contacts of Structural Units in PDB entry:
3WWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3WWX entry

There is 1 chain in PDB entry 3WWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 38ALA 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3WWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 53Right-handed alpha
Helix 2
2
A
87 102Right-handed alpha
Helix 3
3
A
110 115Right-handed alpha
Helix 4
4
A
120 124Right-handed 310
Helix 5
5
A
130 136Right-handed alpha
Helix 6
6
A
143 146Right-handed 310
Helix 7
7
A
147 155Right-handed alpha
Helix 8
8
A
158 163Right-handed alpha
Helix 9
9
A
168 178Right-handed alpha
Helix 10
10
A
192 208Right-handed alpha
Helix 11
11
A
210 219Right-handed alpha
Helix 12
12
A
263 271Right-handed 310
Helix 13
13
A
276 289Right-handed alpha
Helix 14
14
A
294 302Right-handed alpha
Helix 15
15
A
366 377Right-handed alpha
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There are 3 sheets in PDB entry 3WWX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
57 64anti-parallel
Strand 3
A
353 359anti-parallel
Strand 4
A
341 348anti-parallel
Strand 5
A
330 338anti-parallel
Strand 6
A
321 324anti-parallel
Strand 7
A
315 316anti-parallel
Strand 8
A
305 306anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
274 275anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
257 258anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il