Analysis of interatomic Contacts of Structural Units in PDB entry:
3ZIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ZIM entry

There is 1 chain in PDB entry 3ZIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 107ALA 1046
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3ZIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
107 122Right-handed alpha
Helix 2
2
A
125 130Right-handed alpha
Helix 3
3
A
133 143Right-handed alpha
Helix 4
4
A
143 155Right-handed alpha
Helix 5
5
A
159 167Right-handed alpha
Helix 6
6
A
178 184Right-handed alpha
Helix 7
7
A
216 230Right-handed alpha
Helix 8
8
A
266 269Right-handed 310
Helix 9
9
A
270 279Right-handed alpha
Helix 10
10
A
290 297Right-handed alpha
Helix 11
11
A
305 309Right-handed 310
Helix 12
12
A
394 396Right-handed 310
Helix 13
13
A
488 505Right-handed alpha
Helix 14
14
A
507 513Right-handed alpha
Helix 15
15
A
524 536Right-handed alpha
Helix 16
16
A
544 554Right-handed alpha
Helix 17
17
A
556 561Right-handed 310
Helix 18
18
A
561 563Right-handed 310
Helix 19
19
A
564 571Right-handed alpha
Helix 20
20
A
576 589Right-handed alpha
Helix 21
21
A
594 601Right-handed alpha
Helix 22
22
A
608 623Right-handed alpha
Helix 23
23
A
624 631Right-handed alpha
Helix 24
24
A
631 638Right-handed alpha
Helix 25
25
A
639 642Right-handed 310
Helix 26
26
A
647 660Right-handed alpha
Helix 27
27
A
660 674Right-handed alpha
Helix 28
28
A
680 695Right-handed alpha
Helix 29
29
A
697 720Right-handed alpha
Helix 30
30
A
727 740Right-handed alpha
Helix 31
31
A
741 748Right-handed alpha
Helix 32
32
A
789 794Right-handed alpha
Helix 33
33
A
807 827Right-handed alpha
Helix 34
34
A
857 863Right-handed alpha
Helix 35
35
A
875 885Right-handed alpha
Helix 36
36
A
886 888Right-handed 310
Helix 37
37
A
889 912Right-handed alpha
Helix 38
38
A
957 965Right-handed alpha
Helix 39
39
A
974 994Right-handed alpha
Helix 40
40
A
994 1004Right-handed alpha
Helix 41
41
A
1015 1026Right-handed alpha
Helix 42
42
A
1031 1046Right-handed alpha
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There are 9 sheets in PDB entry 3ZIM. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 212first strand
Strand 2
A
189 197anti-parallel
Strand 3
A
284 289parallel
Strand 4
A
250 254anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 392first strand
Strand 2
A
333 342anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
440 444anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
355 362anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 372first strand
Strand 2
A
355 362anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
421 428anti-parallel
Strand 3
A
401 407anti-parallel
Strand 4
A
355 362anti-parallel
Strand 5
A
365 366anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
421 428anti-parallel
Strand 3
A
401 407anti-parallel
Strand 4
A
355 362anti-parallel
Strand 5
A
371 372anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
751 752first strand
Strand 2
A
760 761anti-parallel
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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
779 784anti-parallel
Strand 3
A
796 803anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 842anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
921 924anti-parallel
Strand 3
A
929 931anti-parallel
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