Analysis of interatomic Contacts of Structural Units in PDB entry:
4A14


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4A14 entry

There is 1 chain in PDB entry 4A14 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 9GLN 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 4A14. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 29Right-handed alpha
Helix 2
2
A
39 41Right-handed 310
Helix 3
3
A
63 72Right-handed alpha
Helix 4
4
A
72 81Right-handed alpha
Helix 5
5
A
96 102Right-handed alpha
Helix 6
6
A
115 131Right-handed alpha
Helix 7
7
A
159 163Right-handed 310
Helix 8
8
A
185 202Right-handed alpha
Helix 9
9
A
210 214Right-handed 310
Helix 10
10
A
274 287Right-handed alpha
Helix 11
11
A
297 300Right-handed 310
Helix 12
12
A
301 307Right-handed alpha
Helix 13
13
A
329 343Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 4A14. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
14 19parallel
Strand 3
A
316 323parallel
Strand 4
A
85 90parallel
Strand 5
A
240 249parallel
Strand 6
A
215 225anti-parallel
Strand 7
A
135 146anti-parallel
Strand 8
A
149 152anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
14 19parallel
Strand 3
A
316 323parallel
Strand 4
A
85 90parallel
Strand 5
A
240 249parallel
Strand 6
A
215 225anti-parallel
Strand 7
A
135 146anti-parallel
Strand 8
A
181 182anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 152first strand
Strand 2
A
135 146anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 38first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
50 53anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 167first strand
Strand 2
A
173 176anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il