Analysis of interatomic Contacts of Structural Units in PDB entry:
4BPI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4BPI entry

There are 7 chains in PDB entry 4BPI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 172GLU 322
B
 ALA 87GLU 88
B
 ILE 90ALA 92
B
 LEU 94ARG 95
B
 MET 97ASP 99
B
 LEU 101ASN 102
B
 GLN 104TYR 105
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4BPI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
172 191Right-handed alpha
Helix 2
2
A
204 224Right-handed alpha
Helix 3
3
A
224 235Right-handed alpha
Helix 4
4
A
243 254Right-handed alpha
Helix 5
5
A
255 257Right-handed 310
Helix 6
6
A
260 282Right-handed alpha
Helix 7
7
A
287 309Right-handed alpha
Helix 8
8
A
310 319Right-handed alpha
Helix 9
9
B
88 104Right-handed alpha
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There are no sheets in PDB entry 4BPI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il