Analysis of interatomic Contacts of Structural Units in PDB entry:
4CGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4CGS entry

There are 4 chains in PDB entry 4CGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 0CYS 43
A
HIS 45LEU 167
B
ALA 0CYS 43
B
HIS 45TYR 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 4CGS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1 5Right-handed 310
Helix 2
2
A
10 17Right-handed alpha
Helix 3
3
A
18 20Right-handed 310
Helix 4
4
A
22 26Right-handed 310
Helix 5
5
A
28 48Right-handed alpha
Helix 6
6
A
65 77Right-handed alpha
Helix 7
7
A
129 136Right-handed alpha
Helix 8
8
A
137 156Right-handed alpha
Helix 9
9
A
159 165Right-handed alpha
Helix 10
10
B
1 5Right-handed 310
Helix 11
11
B
10 17Right-handed alpha
Helix 12
12
B
18 20Right-handed 310
Helix 13
13
B
22 26Right-handed 310
Helix 14
14
B
28 48Right-handed alpha
Helix 15
15
B
65 77Right-handed alpha
Helix 16
16
B
129 136Right-handed alpha
Helix 17
17
B
137 156Right-handed alpha
Helix 18
18
B
159 168Right-handed alpha
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There are 4 sheets in PDB entry 4CGS. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
51 52first strand
Strand 2
A
55 56anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 60first strand
Strand 2
A
88 90anti-parallel
Strand 3
A
95 102anti-parallel
Strand 4
A
117 123parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
51 52first strand
Strand 2
B
55 56anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
58 60first strand
Strand 2
B
88 90anti-parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
117 123parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il