Analysis of interatomic Contacts of Structural Units in PDB entry:
4D61

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4D61 entry

There are 37 chains in PDB entry 4D61 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	U 1	A 1869
A	SER 2	GLU 219
B	VAL 21	GLY 233
C	ASP 57	THR 278
D	ALA 2	PRO 213
E	ALA 2	THR 258
F	ILE 17	ARG 204
G	MET 1	ARG 232
H	SER 4	LEU 194
I	GLY 2	LYS 208
J	PRO 2	LYS 180
K	LEU 2	ARG 95
L	ALA 2	LYS 147
M	VAL 11	CYS 130
N	GLY 2	ALA 151
O	ILE 15	LEU 151
P	PHE 12	GLY 129
Q	GLN 8	ARG 146
R	GLY 2	PRO 122
S	SER 2	GLY 143
T	PRO 2	LYS 144
U	HIS 18	ASP 118
V	MET 1	PHE 83
W	VAL 2	PHE 130
X	LEU 7	ARG 140
Y	THR 4	VAL 125
Z	VAL 40	GLY 115
a	THR 2	PRO 97
b	ALA 4	GLN 83
c	PRO 8	ARG 69
d	GLN 4	ASP 56
e	LEU 6	ASN 56
f	ASN 91	ASN 151
g	THR 2	GLY 315
h	PRO 5	HIS 440
i	LYS 201	GLU 626
j	A 6030	A 6230

There are187 helices in PDB entry 4D61. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	11	22	Right-handed alpha
Helix 2	2	A	50	66	Right-handed alpha
Helix 3	3	A	70	72	Right-handed 310
Helix 4	4	A	80	94	Right-handed alpha
Helix 5	5	A	130	141	Right-handed alpha
Helix 6	6	A	167	187	Right-handed alpha
Helix 7	7	A	198	202	Right-handed 310
Helix 8	8	A	205	219	Right-handed alpha
Helix 9	9	B	57	63	Right-handed alpha
Helix 10	10	B	71	76	Right-handed alpha
Helix 11	11	B	106	114	Right-handed alpha
Helix 12	12	B	158	176	Right-handed alpha
Helix 13	13	B	179	189	Right-handed alpha
Helix 14	14	B	191	202	Right-handed alpha
Helix 15	15	B	224	229	Right-handed alpha
Helix 16	16	B	230	232	Right-handed 310
Helix 17	17	C	64	72	Right-handed alpha
Helix 18	18	C	77	85	Right-handed alpha
Helix 19	19	C	91	98	Right-handed alpha
Helix 20	20	C	99	102	Right-handed 310
Helix 21	21	C	146	161	Right-handed alpha
Helix 22	22	C	207	218	Right-handed alpha
Helix 23	23	C	232	247	Right-handed alpha
Helix 24	24	C	248	250	Right-handed 310
Helix 25	25	C	252	256	Right-handed 310
Helix 26	26	C	264	269	Right-handed alpha
Helix 27	27	C	269	274	Right-handed alpha
Helix 28	28	D	6	29	Right-handed alpha
Helix 29	29	D	54	60	Right-handed alpha
Helix 30	30	D	63	78	Right-handed alpha
Helix 31	31	D	97	111	Right-handed alpha
Helix 32	32	D	114	130	Right-handed alpha
Helix 33	33	D	163	167	Right-handed alpha
Helix 34	34	E	15	19	Right-handed 310
Helix 35	35	E	43	50	Right-handed alpha
Helix 36	36	E	57	67	Right-handed alpha
Helix 37	37	E	115	120	Right-handed alpha
Helix 38	38	E	247	256	Right-handed alpha
Helix 39	39	F	67	77	Right-handed alpha
Helix 40	40	F	79	83	Right-handed 310
Helix 41	41	F	85	103	Right-handed alpha
Helix 42	42	F	107	120	Right-handed alpha
Helix 43	43	F	142	162	Right-handed alpha
Helix 44	44	F	168	182	Right-handed alpha
Helix 45	45	F	187	204	Right-handed alpha
Helix 46	46	G	24	28	Right-handed 310
Helix 47	47	G	39	41	Right-handed 310
Helix 48	48	G	121	127	Right-handed alpha
Helix 49	49	G	137	146	Right-handed alpha
Helix 50	50	G	181	232	Right-handed alpha
Helix 51	51	H	4	7	Right-handed 310
Helix 52	52	H	17	32	Right-handed alpha
Helix 53	53	H	35	41	Right-handed alpha
Helix 54	54	H	68	75	Right-handed alpha
Helix 55	55	H	75	87	Right-handed alpha
Helix 56	56	H	121	134	Right-handed alpha
Helix 57	57	H	162	181	Right-handed alpha
Helix 58	58	I	6	10	Right-handed 310
Helix 59	59	I	25	29	Right-handed 310
Helix 60	60	I	88	94	Right-handed alpha
Helix 61	61	I	106	118	Right-handed alpha
Helix 62	62	I	144	152	Right-handed alpha
Helix 63	63	I	159	169	Right-handed alpha
Helix 64	64	I	178	183	Right-handed alpha
Helix 65	65	I	191	208	Right-handed alpha
Helix 66	66	J	21	36	Right-handed alpha
Helix 67	67	J	39	62	Right-handed alpha
Helix 68	68	J	67	85	Right-handed alpha
Helix 69	69	J	88	92	Right-handed 310
Helix 70	70	J	93	100	Right-handed 310
Helix 71	71	J	101	108	Right-handed alpha
Helix 72	72	J	109	117	Right-handed alpha
Helix 73	73	J	122	132	Right-handed alpha
Helix 74	74	J	150	155	Right-handed alpha
Helix 75	75	J	171	180	Right-handed alpha
Helix 76	76	K	4	19	Right-handed alpha
Helix 77	77	K	41	56	Right-handed alpha
Helix 78	78	K	72	84	Right-handed alpha
Helix 79	79	L	2	7	Right-handed alpha
Helix 80	80	L	18	26	Right-handed 310
Helix 81	81	L	47	52	Right-handed alpha
Helix 82	82	M	11	28	Right-handed alpha
Helix 83	83	M	34	44	Right-handed alpha
Helix 84	84	M	60	72	Right-handed alpha
Helix 85	85	M	81	90	Right-handed alpha
Helix 86	86	M	120	127	Right-handed alpha
Helix 87	87	N	29	44	Right-handed alpha
Helix 88	88	N	46	59	Right-handed alpha
Helix 89	89	N	62	68	Right-handed alpha
Helix 90	90	N	70	79	Right-handed alpha
Helix 91	91	N	85	105	Right-handed alpha
Helix 92	92	N	108	132	Right-handed alpha
Helix 93	93	N	143	151	Right-handed alpha
Helix 94	94	O	58	62	Right-handed alpha
Helix 95	95	O	65	69	Right-handed 310
Helix 96	96	O	70	89	Right-handed alpha
Helix 97	97	O	110	122	Right-handed alpha
Helix 98	98	P	21	27	Right-handed alpha
Helix 99	99	P	29	37	Right-handed alpha
Helix 100	100	P	38	47	Right-handed alpha
Helix 101	101	P	53	67	Right-handed alpha
Helix 102	102	P	86	90	Right-handed 310
Helix 103	103	P	108	112	Right-handed 310
Helix 104	104	P	115	120	Right-handed alpha
Helix 105	105	Q	38	42	Right-handed 310
Helix 106	106	Q	47	59	Right-handed alpha
Helix 107	107	Q	60	65	Right-handed alpha
Helix 108	108	Q	76	100	Right-handed alpha
Helix 109	109	Q	101	116	Right-handed alpha
Helix 110	110	R	6	21	Right-handed alpha
Helix 111	111	R	27	38	Right-handed alpha
Helix 112	112	R	43	64	Right-handed alpha
Helix 113	113	R	75	82	Right-handed alpha
Helix 114	114	R	100	110	Right-handed alpha
Helix 115	115	S	25	31	Right-handed alpha
Helix 116	116	S	37	49	Right-handed alpha
Helix 117	117	S	60	73	Right-handed alpha
Helix 118	118	S	73	78	Right-handed alpha
Helix 119	119	S	80	84	Right-handed 310
Helix 120	120	S	99	118	Right-handed alpha
Helix 121	121	S	119	128	Right-handed alpha
Helix 122	122	T	5	9	Right-handed 310
Helix 123	123	T	10	26	Right-handed alpha
Helix 124	124	T	31	36	Right-handed alpha
Helix 125	125	T	51	67	Right-handed alpha
Helix 126	126	T	71	79	Right-handed alpha
Helix 127	127	T	96	110	Right-handed alpha
Helix 128	128	T	124	144	Right-handed alpha
Helix 129	129	U	28	46	Right-handed alpha
Helix 130	130	U	94	103	Right-handed alpha
Helix 131	131	V	56	63	Right-handed alpha
Helix 132	132	V	64	76	Right-handed alpha
Helix 133	133	W	5	21	Right-handed alpha
Helix 134	134	W	31	45	Right-handed alpha
Helix 135	135	W	82	84	Right-handed 310
Helix 136	136	W	85	94	Right-handed alpha
Helix 137	137	W	113	120	Right-handed alpha
Helix 138	138	X	9	22	Right-handed alpha
Helix 139	139	X	24	32	Right-handed alpha
Helix 140	140	X	33	38	Right-handed alpha
Helix 141	141	X	89	94	Right-handed alpha
Helix 142	142	X	130	135	Right-handed alpha
Helix 143	143	Y	36	48	Right-handed alpha
Helix 144	144	Y	51	53	Right-handed 310
Helix 145	145	Y	78	86	Right-handed alpha
Helix 146	146	Y	87	95	Right-handed alpha
Helix 147	147	Y	103	116	Right-handed alpha
Helix 148	148	Y	118	123	Right-handed alpha
Helix 149	149	Z	51	61	Right-handed alpha
Helix 150	150	Z	69	78	Right-handed alpha
Helix 151	151	Z	80	94	Right-handed alpha
Helix 152	152	a	46	56	Right-handed alpha
Helix 153	153	a	74	79	Right-handed alpha
Helix 154	154	b	11	18	Right-handed alpha
Helix 155	155	b	19	23	Right-handed 310
Helix 156	156	d	15	19	Right-handed 310
Helix 157	157	d	39	51	Right-handed alpha
Helix 158	158	e	10	15	Right-handed alpha
Helix 159	159	e	32	42	Right-handed alpha
Helix 160	160	h	9	27	Right-handed alpha
Helix 161	161	h	44	63	Right-handed alpha
Helix 162	162	h	64	85	Right-handed alpha
Helix 163	163	h	103	105	Right-handed 310
Helix 164	164	h	132	140	Right-handed alpha
Helix 165	165	h	186	193	Right-handed alpha
Helix 166	166	h	193	214	Right-handed alpha
Helix 167	167	h	231	238	Right-handed alpha
Helix 168	168	h	244	250	Right-handed alpha
Helix 169	169	h	261	272	Right-handed alpha
Helix 170	170	h	279	296	Right-handed alpha
Helix 171	171	h	304	315	Right-handed alpha
Helix 172	172	h	347	349	Right-handed 310
Helix 173	173	h	350	358	Right-handed alpha
Helix 174	174	h	373	386	Right-handed alpha
Helix 175	175	h	396	407	Right-handed alpha
Helix 176	176	h	433	440	Right-handed alpha
Helix 177	177	i	215	227	Right-handed alpha
Helix 178	178	i	231	245	Right-handed alpha
Helix 179	179	i	247	254	Right-handed alpha
Helix 180	180	i	258	265	Right-handed alpha
Helix 181	181	i	294	302	Right-handed alpha
Helix 182	182	i	315	325	Right-handed alpha
Helix 183	183	i	328	339	Right-handed alpha
Helix 184	184	i	361	369	Right-handed alpha
Helix 185	185	i	371	377	Right-handed alpha
Helix 186	186	i	378	384	Right-handed alpha
Helix 187	187	i	412	420	Right-handed alpha

There are 68 sheets in PDB entry 4D61. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, BC, BD, BE, CA, CB, A, DB, C, EA, EB, EC, ED, FA, GA, GB, GC, HA, HB, IA, IB, JA, KA, LA, MA, MB, OA, PA, QA, SA, TA, TB, UA, UB, UC, UD, VA, WA, WB, WC, WD, XA, YA, ZA, AA, AB, BA, BB, FA, FB, GA, GB, GC, GD, GE, GF, GG, HA, HB, HC, HD, IA, IB, IC, ID,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	41	first strand
Strand 2	A	47	49	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	100	first strand
Strand 2	A	74	78	parallel
Strand 3	A	121	124	parallel
Strand 4	A	144	148	parallel
Strand 5	A	159	162	parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	34	first strand
Strand 2	B	43	48	anti-parallel

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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	70	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	99	104	anti-parallel
Strand 4	B	215	219	anti-parallel
Strand 5	B	134	142	anti-parallel
Strand 6	B	208	211	anti-parallel

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There are 6 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	70	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	99	104	anti-parallel
Strand 4	B	215	219	anti-parallel
Strand 5	B	134	142	anti-parallel
Strand 6	B	120	128	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	208	211	first strand
Strand 2	B	134	142	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	95	96	anti-parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	104	115	first strand
Strand 2	C	120	130	anti-parallel
Strand 3	C	136	144	anti-parallel
Strand 4	C	163	164	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	188	first strand
Strand 2	C	191	196	anti-parallel
Strand 3	C	222	227	anti-parallel
Strand 4	C	204	205	parallel

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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	41	first strand
Strand 2	D	46	52	anti-parallel
Strand 3	D	84	90	parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	155	first strand
Strand 2	D	133	140	anti-parallel
Strand 3	D	181	189	anti-parallel
Strand 4	D	168	176	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	209	210	first strand
Strand 2	R	39	40	anti-parallel

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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	10	first strand
Strand 2	E	27	28	anti-parallel

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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	75	76	first strand
Strand 2	E	70	72	anti-parallel
Strand 3	E	89	92	anti-parallel
Strand 4	E	97	103	anti-parallel
Strand 5	E	109	114	anti-parallel

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There are 5 strands in EC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	145	148	first strand
Strand 2	E	137	141	anti-parallel
Strand 3	E	121	131	anti-parallel
Strand 4	E	158	163	anti-parallel
Strand 5	E	168	174	anti-parallel

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There are 5 strands in ED sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	217	221	first strand
Strand 2	E	207	211	anti-parallel
Strand 3	E	192	199	anti-parallel
Strand 4	E	180	183	anti-parallel
Strand 5	E	225	229	anti-parallel

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	123	128	first strand
Strand 2	F	135	141	anti-parallel
Strand 3	c	41	47	parallel
Strand 4	c	27	34	anti-parallel
Strand 5	c	9	21	anti-parallel
Strand 6	c	55	59	anti-parallel

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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	17	first strand
Strand 2	G	2	7	anti-parallel
Strand 3	G	108	115	parallel
Strand 4	G	49	56	anti-parallel
Strand 5	G	35	37	anti-parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	72	76	first strand
Strand 2	G	94	98	anti-parallel

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	160	163	first strand
Strand 2	G	169	172	anti-parallel

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There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	47	52	first strand
Strand 2	H	58	65	anti-parallel
Strand 3	H	91	97	parallel

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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	184	188	first strand
Strand 2	H	152	158	parallel
Strand 3	H	139	146	anti-parallel
Strand 4	W	50	53	anti-parallel
Strand 5	W	60	64	anti-parallel
Strand 6	W	24	27	anti-parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	42	47	first strand
Strand 2	I	53	59	anti-parallel

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There are 6 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	62	67	first strand
Strand 2	I	72	81	anti-parallel
Strand 3	I	101	104	anti-parallel
Strand 4	I	171	175	anti-parallel
Strand 5	I	186	189	anti-parallel
Strand 6	I	62	67	parallel

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There are 3 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	140	141	first strand
Strand 2	J	136	137	anti-parallel
Strand 3	J	157	158	anti-parallel

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There are 3 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	20	24	first strand
Strand 2	K	66	71	anti-parallel
Strand 3	K	58	63	anti-parallel

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There are 6 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	68	79	first strand
Strand 2	L	125	131	anti-parallel
Strand 3	L	140	145	anti-parallel
Strand 4	L	101	112	parallel
Strand 5	L	85	96	anti-parallel
Strand 6	L	68	79	anti-parallel

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There are 4 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	31	33	first strand
Strand 2	M	108	111	anti-parallel
Strand 3	M	49	53	anti-parallel
Strand 4	M	76	79	parallel

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There are 2 strands in MB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	92	94	first strand
Strand 2	M	100	103	anti-parallel

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There are 5 strands in OA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	52	57	first strand
Strand 2	O	40	45	anti-parallel
Strand 3	O	28	35	anti-parallel
Strand 4	O	92	98	parallel
Strand 5	O	125	131	parallel

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There are 3 strands in PA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	76	78	first strand
Strand 2	P	93	97	parallel
Strand 3	P	102	106	anti-parallel

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There are 4 strands in QA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	10	16	first strand
Strand 2	Q	19	27	anti-parallel
Strand 3	Q	66	72	anti-parallel
Strand 4	Q	31	34	parallel

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There are 2 strands in SA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	86	87	first strand
Strand 2	S	95	96	anti-parallel

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There are 2 strands in TA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	81	83	first strand
Strand 2	T	91	93	anti-parallel

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There are 2 strands in TB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	113	115	first strand
Strand 2	T	121	123	anti-parallel

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There are 2 strands in UA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	49	55	first strand
Strand 2	U	77	92	parallel

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There are 2 strands in UB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	59	66	first strand
Strand 2	U	77	92	anti-parallel

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There are 4 strands in UC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	110	117	first strand
Strand 2	U	19	26	anti-parallel
Strand 3	U	77	92	anti-parallel
Strand 4	U	59	66	anti-parallel

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There are 4 strands in UD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	110	117	first strand
Strand 2	U	19	26	anti-parallel
Strand 3	U	77	92	anti-parallel
Strand 4	U	49	55	parallel

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There are 2 strands in VA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	32	39	first strand
Strand 2	V	46	55	anti-parallel

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There are 2 strands in WA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	71	74	first strand
Strand 2	W	123	130	anti-parallel

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There are 2 strands in WB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	80	81	first strand
Strand 2	W	123	130	parallel

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There are 4 strands in WC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	109	112	first strand
Strand 2	W	101	106	anti-parallel
Strand 3	W	123	130	anti-parallel
Strand 4	W	80	81	parallel

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There are 4 strands in WD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	109	112	first strand
Strand 2	W	101	106	anti-parallel
Strand 3	W	123	130	anti-parallel
Strand 4	W	71	74	anti-parallel

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There are 7 strands in XA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	46	58	first strand
Strand 2	X	99	104	anti-parallel
Strand 3	X	120	125	first strand
Strand 4	X	82	84	parallel
Strand 5	X	66	74	anti-parallel
Strand 6	X	46	58	first strand
Strand 7	Y	6	15	first strand

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There are 4 strands in YA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	20	28	anti-parallel
Strand 2	Y	68	76	anti-parallel
Strand 3	Y	55	62	anti-parallel
Strand 4	Z	67	68	first strand

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There are 3 strands in ZA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	107	111	anti-parallel
Strand 2	Z	97	102	anti-parallel
Strand 3	a	20	22	first strand

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	29	31	anti-parallel
Strand 2	a	40	43	first strand

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	66	69	parallel
Strand 2	b	43	47	first strand
Strand 3	b	32	36	anti-parallel
Strand 4	b	79	81	anti-parallel
Strand 5	b	54	55	first strand

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	62	65	anti-parallel
Strand 2	b	72	73	anti-parallel

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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	106	109	first strand
Strand 2	f	113	116	anti-parallel
Strand 3	f	133	134	first strand
Strand 4	f	139	140	anti-parallel
Strand 5	f	147	148	anti-parallel
Strand 6	g	3	12	first strand

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There are 6 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	306	314	anti-parallel
Strand 2	g	297	301	parallel
Strand 3	g	288	291	anti-parallel
Strand 4	g	18	23	first strand
Strand 5	g	30	35	anti-parallel
Strand 6	g	39	45	anti-parallel

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There are 3 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	53	60	anti-parallel
Strand 2	g	68	71	first strand
Strand 3	g	77	81	anti-parallel

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There are 5 strands in GA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	86	91	anti-parallel
Strand 2	g	95	102	anti-parallel
Strand 3	g	108	113	first strand
Strand 4	g	120	124	anti-parallel
Strand 5	g	129	132	anti-parallel

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There are 2 strands in GB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	143	144	anti-parallel
Strand 2	g	151	156	first strand

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There are 2 strands in GC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	164	169	anti-parallel
Strand 2	g	173	178	anti-parallel

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There are 4 strands in GD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	183	189	anti-parallel
Strand 2	g	195	200	first strand
Strand 3	g	206	211	anti-parallel
Strand 4	g	215	220	anti-parallel

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There are 4 strands in GE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	225	231	anti-parallel
Strand 2	g	236	241	first strand
Strand 3	g	247	252	anti-parallel
Strand 4	g	256	260	anti-parallel

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There are 4 strands in GF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	265	270	anti-parallel
Strand 2	h	107	114	first strand
Strand 3	h	93	101	anti-parallel
Strand 4	h	34	39	parallel

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There are 4 strands in GG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	124	128	anti-parallel
Strand 2	h	165	172	first strand
Strand 3	h	156	162	parallel
Strand 4	h	146	151	anti-parallel

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There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	225	228	anti-parallel
Strand 2	h	253	255	anti-parallel
Strand 3	h	301	303	first strand

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There are 6 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	409	413	anti-parallel
Strand 2	h	317	323	anti-parallel
Strand 3	h	388	392	parallel
Strand 4	h	333	334	first strand
Strand 5	h	367	368	anti-parallel
Strand 6	i	273	277	first strand

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There are 4 strands in HC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	282	288	anti-parallel
Strand 2	i	203	210	parallel
Strand 3	i	307	313	parallel
Strand 4	i	343	349	parallel

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There are 2 strands in HD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	388	389	parallel
Strand 2	i	433	439	first strand

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	508	510	anti-parallel
Strand 2	i	460	463	anti-parallel

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There are 6 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	468	477	anti-parallel
Strand 2	i	480	481	anti-parallel
Strand 3	i	445	449	parallel
Strand 4	i	490	496	anti-parallel
Strand 5	i	433	439	anti-parallel
Strand 6	i	455	456	first strand

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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	484	485	anti-parallel
Strand 2	i	519	528	first strand

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There are 14 strands in ID sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	613	625	anti-parallel
Strand 2	i	540	545	first strand
Strand 3	i	548	561	anti-parallel
Strand 4	i	568	571	first strand
Strand 5	i	581	588	anti-parallel
Strand 6	i	605	610	first strand
Strand 7	i	519	528	anti-parallel
Strand 8		0	0	first strand
Strand 9		0	0	first strand
Strand 10		0	0	first strand
Strand 11		0	0	first strand
Strand 12		0	0	first strand
Strand 13		0	0	first strand
Strand 14		0	0	first strand

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4D61

Analysis of interatomic Contacts of Structural Units in PDB entry:
4D61