Analysis of interatomic Contacts of Structural Units in PDB entry:
4E12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4E12 entry

There is 1 chain in PDB entry 4E12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 283
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4E12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
36 58Right-handed alpha
Helix 3
3
A
64 73Right-handed alpha
Helix 4
4
A
78 83Right-handed alpha
Helix 5
5
A
96 111Right-handed alpha
Helix 6
6
A
125 134Right-handed alpha
Helix 7
7
A
135 137Right-handed 310
Helix 8
8
A
163 177Right-handed alpha
Helix 9
9
A
192 210Right-handed alpha
Helix 10
10
A
214 227Right-handed alpha
Helix 11
11
A
231 240Right-handed alpha
Helix 12
12
A
240 250Right-handed alpha
Helix 13
13
A
252 266Right-handed alpha
Helix 14
14
A
267 270Right-handed 310
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There is 1 sheet ( A) in PDB entry 4E12.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
29 33parallel
Strand 3
A
6 10parallel
Strand 4
A
88 91parallel
Strand 5
A
116 119parallel
Strand 6
A
139 144parallel
Strand 7
A
153 158anti-parallel
Strand 8
A
180 183parallel
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