Analysis of interatomic Contacts of Structural Units in PDB entry:
4EVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4EVW entry

There are 2 chains in PDB entry 4EVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 244
B
 MSE 1GLN 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4EVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 16Right-handed alpha
Helix 2
2
A
21 24Right-handed 310
Helix 3
3
A
32 38Right-handed alpha
Helix 4
4
A
39 44Right-handed 310
Helix 5
5
A
58 71Right-handed alpha
Helix 6
6
A
86 101Right-handed alpha
Helix 7
7
A
124 129Right-handed 310
Helix 8
8
A
179 192Right-handed alpha
Helix 9
9
A
193 198Right-handed 310
Helix 10
10
A
207 215Right-handed alpha
Helix 11
11
A
225 229Right-handed 310
Helix 12
12
A
234 244Right-handed alpha
Helix 13
13
B
10 17Right-handed alpha
Helix 14
14
B
21 24Right-handed 310
Helix 15
15
B
32 38Right-handed alpha
Helix 16
16
B
39 44Right-handed 310
Helix 17
17
B
58 71Right-handed alpha
Helix 18
18
B
86 101Right-handed alpha
Helix 19
19
B
124 129Right-handed 310
Helix 20
20
B
179 192Right-handed alpha
Helix 21
21
B
194 198Right-handed 310
Helix 22
22
B
207 215Right-handed alpha
Helix 23
23
B
225 229Right-handed 310
Helix 24
24
B
234 244Right-handed alpha
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There are 8 sheets in PDB entry 4EVW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 80first strand
Strand 2
A
49 54parallel
Strand 3
A
2 5parallel
Strand 4
A
109 111parallel
Strand 5
A
169 177anti-parallel
Strand 6
A
132 138anti-parallel
Strand 7
A
219 223parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
30 31anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
230 231anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 149first strand
Strand 2
A
157 161anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 80first strand
Strand 2
B
49 54parallel
Strand 3
B
2 5parallel
Strand 4
B
109 111parallel
Strand 5
B
169 177anti-parallel
Strand 6
B
132 138anti-parallel
Strand 7
B
219 223parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
B
30 31anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
230 231anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 149first strand
Strand 2
B
157 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il