Analysis of interatomic Contacts of Structural Units in PDB entry:
4FDD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FDD entry

There are 2 chains in PDB entry 4FDD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TRP 5VAL 890
B
GLY 507TYR 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 4FDD. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
8 23Right-handed alpha
Helix 2
2
A
26 41Right-handed alpha
Helix 3
3
A
43 56Right-handed alpha
Helix 4
4
A
61 76Right-handed alpha
Helix 5
5
A
77 78Right-handed 310
Helix 6
6
A
79 83Right-handed 310
Helix 7
7
A
84 97Right-handed alpha
Helix 8
8
A
103 121Right-handed alpha
Helix 9
9
A
128 138Right-handed alpha
Helix 10
10
A
141 160Right-handed alpha
Helix 11
11
A
161 166Right-handed alpha
Helix 12
12
A
171 180Right-handed alpha
Helix 13
13
A
187 200Right-handed alpha
Helix 14
14
A
206 211Right-handed alpha
Helix 15
15
A
212 225Right-handed alpha
Helix 16
16
A
228 246Right-handed alpha
Helix 17
17
A
246 251Right-handed alpha
Helix 18
18
A
253 266Right-handed alpha
Helix 19
19
A
269 284Right-handed alpha
Helix 20
20
A
288 294Right-handed alpha
Helix 21
21
A
296 308Right-handed alpha
Helix 22
22
A
311 320Right-handed alpha
Helix 23
23
A
374 391Right-handed alpha
Helix 24
24
A
394 407Right-handed alpha
Helix 25
25
A
410 424Right-handed alpha
Helix 26
26
A
428 433Right-handed alpha
Helix 27
27
A
435 447Right-handed alpha
Helix 28
28
A
451 465Right-handed alpha
Helix 29
29
A
465 472Right-handed alpha
Helix 30
30
A
477 490Right-handed alpha
Helix 31
31
A
493 512Right-handed alpha
Helix 32
32
A
513 517Right-handed 310
Helix 33
33
A
518 533Right-handed alpha
Helix 34
34
A
534 553Right-handed alpha
Helix 35
35
A
554 557Right-handed 310
Helix 36
36
A
558 576Right-handed alpha
Helix 37
37
A
582 598Right-handed alpha
Helix 38
38
A
599 603Right-handed 310
Helix 39
39
A
604 629Right-handed alpha
Helix 40
40
A
638 656Right-handed alpha
Helix 41
41
A
659 665Right-handed alpha
Helix 42
42
A
667 676Right-handed alpha
Helix 43
43
A
680 698Right-handed alpha
Helix 44
44
A
699 704Right-handed 310
Helix 45
45
A
705 716Right-handed alpha
Helix 46
46
A
721 740Right-handed alpha
Helix 47
47
A
741 746Right-handed 310
Helix 48
48
A
747 759Right-handed alpha
Helix 49
49
A
764 782Right-handed alpha
Helix 50
50
A
782 787Right-handed alpha
Helix 51
51
A
789 803Right-handed alpha
Helix 52
52
A
807 824Right-handed alpha
Helix 53
53
A
825 830Right-handed 310
Helix 54
54
A
831 841Right-handed alpha
Helix 55
55
A
846 873Right-handed alpha
Helix 56
56
A
874 876Right-handed 310
Helix 57
57
A
877 887Right-handed alpha
Helix 58
58
B
513 522Right-handed alpha
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There are no sheets in PDB entry 4FDD

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