Analysis of interatomic Contacts of Structural Units in PDB entry:
4FG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4FG8 entry

There are 2 chains in PDB entry 4FG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 10ALA 299
B
 GLU 14ALA 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 4FG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 18Right-handed 310
Helix 2
2
A
66 71Right-handed alpha
Helix 3
3
A
102 110Right-handed alpha
Helix 4
4
A
114 135Right-handed alpha
Helix 5
5
A
143 145Right-handed 310
Helix 6
6
A
186 191Right-handed alpha
Helix 7
7
A
197 214Right-handed alpha
Helix 8
8
A
222 233Right-handed alpha
Helix 9
9
A
246 257Right-handed alpha
Helix 10
10
A
266 273Right-handed alpha
Helix 11
11
A
273 278Right-handed alpha
Helix 12
12
A
286 298Right-handed alpha
Helix 13
13
B
15 18Right-handed 310
Helix 14
14
B
66 71Right-handed alpha
Helix 15
15
B
103 110Right-handed alpha
Helix 16
16
B
114 135Right-handed alpha
Helix 17
17
B
143 145Right-handed 310
Helix 18
18
B
173 179Right-handed alpha
Helix 19
19
B
186 191Right-handed alpha
Helix 20
20
B
197 214Right-handed alpha
Helix 21
21
B
222 232Right-handed alpha
Helix 22
22
B
246 257Right-handed alpha
Helix 23
23
B
266 273Right-handed alpha
Helix 24
24
B
273 278Right-handed alpha
Helix 25
25
B
286 298Right-handed alpha
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There are 4 sheets in PDB entry 4FG8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
81 86parallel
Strand 3
A
90 95anti-parallel
Strand 4
A
45 52anti-parallel
Strand 5
A
32 39anti-parallel
Strand 6
A
20 29anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
158 160anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 28first strand
Strand 2
B
32 39anti-parallel
Strand 3
B
45 52anti-parallel
Strand 4
B
90 96anti-parallel
Strand 5
B
81 87anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 102first strand
Strand 2
B
147 149anti-parallel
Strand 3
B
158 160anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il