Analysis of interatomic Contacts of Structural Units in PDB entry:
4G5O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4G5O entry

There are 8 chains in PDB entry 4G5O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31GLU 350
B
 LYS 32LEU 348
C
 ALA 31TYR 354
D
 ALA 31TYR 354
E
 GLU 622LEU 643
F
 GLU 622LEU 643
G
 GLU 622LEU 643
H
 GLU 622GLN 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 81 helices in PDB entry 4G5O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 58Right-handed alpha
Helix 2
2
A
62 69Right-handed alpha
Helix 3
3
A
69 92Right-handed alpha
Helix 4
4
A
99 111Right-handed alpha
Helix 5
5
A
120 133Right-handed alpha
Helix 6
6
A
133 142Right-handed alpha
Helix 7
7
A
143 146Right-handed 310
Helix 8
8
A
151 157Right-handed alpha
Helix 9
9
A
158 163Right-handed alpha
Helix 10
10
A
170 176Right-handed alpha
Helix 11
11
A
209 214Right-handed alpha
Helix 12
12
A
228 232Right-handed 310
Helix 13
13
A
241 255Right-handed alpha
Helix 14
14
A
256 260Right-handed 310
Helix 15
15
A
270 281Right-handed alpha
Helix 16
16
A
282 286Right-handed 310
Helix 17
17
A
295 309Right-handed alpha
Helix 18
18
A
328 348Right-handed alpha
Helix 19
19
B
45 58Right-handed alpha
Helix 20
20
B
62 92Right-handed alpha
Helix 21
21
B
99 111Right-handed alpha
Helix 22
22
B
112 117Right-handed 310
Helix 23
23
B
120 133Right-handed alpha
Helix 24
24
B
133 142Right-handed alpha
Helix 25
25
B
143 146Right-handed 310
Helix 26
26
B
151 158Right-handed alpha
Helix 27
27
B
158 163Right-handed alpha
Helix 28
28
B
170 177Right-handed alpha
Helix 29
29
B
208 214Right-handed alpha
Helix 30
30
B
228 230Right-handed 310
Helix 31
31
B
241 255Right-handed alpha
Helix 32
32
B
256 260Right-handed 310
Helix 33
33
B
270 281Right-handed alpha
Helix 34
34
B
282 286Right-handed 310
Helix 35
35
B
295 309Right-handed alpha
Helix 36
36
B
328 346Right-handed alpha
Helix 37
37
C
45 58Right-handed alpha
Helix 38
38
C
62 69Right-handed alpha
Helix 39
39
C
69 91Right-handed alpha
Helix 40
40
C
97 99Right-handed 310
Helix 41
41
C
100 111Right-handed alpha
Helix 42
42
C
120 133Right-handed alpha
Helix 43
43
C
133 141Right-handed alpha
Helix 44
44
C
142 146Right-handed 310
Helix 45
45
C
151 158Right-handed alpha
Helix 46
46
C
158 163Right-handed alpha
Helix 47
47
C
170 176Right-handed alpha
Helix 48
48
C
207 214Right-handed alpha
Helix 49
49
C
228 232Right-handed 310
Helix 50
50
C
241 255Right-handed alpha
Helix 51
51
C
256 260Right-handed 310
Helix 52
52
C
270 278Right-handed alpha
Helix 53
53
C
282 286Right-handed 310
Helix 54
54
C
295 309Right-handed alpha
Helix 55
55
C
328 350Right-handed alpha
Helix 56
56
D
45 58Right-handed alpha
Helix 57
57
D
62 92Right-handed alpha
Helix 58
58
D
99 111Right-handed alpha
Helix 59
59
D
112 114Right-handed 310
Helix 60
60
D
120 133Right-handed alpha
Helix 61
61
D
133 141Right-handed alpha
Helix 62
62
D
142 146Right-handed 310
Helix 63
63
D
151 157Right-handed alpha
Helix 64
64
D
158 163Right-handed alpha
Helix 65
65
D
170 177Right-handed alpha
Helix 66
66
D
207 214Right-handed alpha
Helix 67
67
D
228 232Right-handed 310
Helix 68
68
D
241 255Right-handed alpha
Helix 69
69
D
256 260Right-handed 310
Helix 70
70
D
270 278Right-handed alpha
Helix 71
71
D
282 286Right-handed 310
Helix 72
72
D
295 309Right-handed alpha
Helix 73
73
D
328 351Right-handed alpha
Helix 74
74
E
623 634Right-handed alpha
Helix 75
75
E
636 640Right-handed 310
Helix 76
76
F
623 634Right-handed alpha
Helix 77
77
F
636 640Right-handed 310
Helix 78
78
G
623 632Right-handed alpha
Helix 79
79
G
636 640Right-handed 310
Helix 80
80
H
624 634Right-handed alpha
Helix 81
81
H
636 640Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 4G5O. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 191first strand
Strand 2
A
194 200anti-parallel
Strand 3
A
33 39parallel
Strand 4
A
220 226parallel
Strand 5
A
263 269parallel
Strand 6
A
319 323parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 191first strand
Strand 2
B
194 200anti-parallel
Strand 3
B
33 39parallel
Strand 4
B
220 226parallel
Strand 5
B
263 269parallel
Strand 6
B
319 323parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
185 191first strand
Strand 2
C
194 200anti-parallel
Strand 3
C
32 39parallel
Strand 4
C
220 226parallel
Strand 5
C
263 269parallel
Strand 6
C
319 323parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 191first strand
Strand 2
D
194 200anti-parallel
Strand 3
D
32 39parallel
Strand 4
D
220 226parallel
Strand 5
D
263 269parallel
Strand 6
D
319 323parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il