Analysis of interatomic Contacts of Structural Units in PDB entry:
4GFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GFX entry

There is 1 chain in PDB entry 4GFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 4PRO 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4GFX


There are 5 sheets in PDB entry 4GFX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
7 14first strand
Strand 2
A
26 35anti-parallel
Strand 3
A
97 104anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
39 41first strand
Strand 2
A
89 91anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
70 75first strand
Strand 2
A
43 52anti-parallel
Strand 3
A
121 131anti-parallel
Strand 4
A
134 143anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
54 57first strand
Strand 2
A
60 64anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 119first strand
Strand 2
A
111 114anti-parallel
Strand 3
A
148 150parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il