Analysis of interatomic Contacts of Structural Units in PDB entry:
4GZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4GZZ entry

There are 3 chains in PDB entry 4GZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 7GLN 229
B
LYS 7GLN 229
C
MET 1GLY 847
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 4GZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
33 47Right-handed alpha
Helix 2
2
A
74 84Right-handed alpha
Helix 3
3
A
112 114Right-handed 310
Helix 4
4
A
152 157Right-handed alpha
Helix 5
5
A
206 223Right-handed alpha
Helix 6
6
A
224 226Right-handed 310
Helix 7
7
B
31 45Right-handed alpha
Helix 8
8
B
74 85Right-handed alpha
Helix 9
9
B
152 156Right-handed 310
Helix 10
10
B
206 223Right-handed alpha
Helix 11
11
C
22 29Right-handed alpha
Helix 12
12
C
43 51Right-handed alpha
Helix 13
13
C
81 86Right-handed alpha
Helix 14
14
C
193 200Right-handed alpha
Helix 15
15
C
203 213Right-handed alpha
Helix 16
16
C
215 217Right-handed 310
Helix 17
17
C
218 223Right-handed alpha
Helix 18
18
C
232 243Right-handed alpha
Helix 19
19
C
249 258Right-handed alpha
Helix 20
20
C
271 281Right-handed alpha
Helix 21
21
C
302 314Right-handed alpha
Helix 22
22
C
335 358Right-handed alpha
Helix 23
23
C
359 362Right-handed 310
Helix 24
24
C
376 389Right-handed alpha
Helix 25
25
C
399 408Right-handed alpha
Helix 26
26
C
431 435Right-handed 310
Helix 27
27
C
487 492Right-handed alpha
Helix 28
28
C
535 539Right-handed 310
Helix 29
29
C
543 547Right-handed 310
Helix 30
30
C
549 553Right-handed 310
Helix 31
31
C
554 565Right-handed alpha
Helix 32
32
C
566 568Right-handed 310
Helix 33
33
C
583 591Right-handed alpha
Helix 34
34
C
692 697Right-handed alpha
Helix 35
35
C
731 735Right-handed 310
Helix 36
36
C
872 880Right-handed 310
Helix 37
37
C
882 898Right-handed alpha
Helix 38
38
C
910 933Right-handed alpha
Helix 39
39
C
937 951Right-handed alpha
Helix 40
40
C
958 969Right-handed alpha
Helix 41
41
C
1033 1044Right-handed alpha
Helix 42
42
C
1045 1054Right-handed alpha
Helix 43
43
C
1062 1073Right-handed alpha
Helix 44
44
C
1082 1094Right-handed alpha
Helix 45
45
D
14 21Right-handed alpha
Helix 46
46
D
82 89Right-handed alpha
Helix 47
47
D
101 106Right-handed alpha
Helix 48
48
D
121 129Right-handed alpha
Helix 49
49
D
154 163Right-handed alpha
Helix 50
50
D
457 467Right-handed alpha
Helix 51
51
D
469 481Right-handed alpha
Helix 52
52
D
485 504Right-handed alpha
Helix 53
53
D
508 511Right-handed 310
Helix 54
54
D
539 560Right-handed alpha
Helix 55
55
D
563 583Right-handed alpha
Helix 56
56
D
615 620Right-handed alpha
Helix 57
57
D
646 653Right-handed alpha
Helix 58
58
D
653 664Right-handed alpha
Helix 59
59
D
669 677Right-handed alpha
Helix 60
60
D
684 696Right-handed alpha
Helix 61
61
D
709 711Right-handed 310
Helix 62
62
D
730 734Right-handed 310
Helix 63
63
D
752 763Right-handed alpha
Helix 64
64
D
764 768Right-handed 310
Helix 65
65
D
782 793Right-handed alpha
Helix 66
66
D
814 823Right-handed alpha
Helix 67
67
D
835 841Right-handed alpha
Helix 68
68
D
845 854Right-handed alpha
Helix 69
69
D
876 891Right-handed alpha
Helix 70
70
D
892 900Right-handed alpha
Helix 71
71
D
907 923Right-handed alpha
Helix 72
72
D
923 946Right-handed alpha
Helix 73
73
D
959 981Right-handed alpha
Helix 74
74
D
984 1015Right-handed alpha
Helix 75
75
D
1018 1026Right-handed alpha
Helix 76
76
D
1031 1039Right-handed alpha
Helix 77
77
D
1066 1086Right-handed alpha
Helix 78
78
D
1087 1089Right-handed 310
Helix 79
79
D
1090 1100Right-handed alpha
Helix 80
80
D
1136 1145Right-handed alpha
Helix 81
81
D
1167 1181Right-handed alpha
Helix 82
82
D
1190 1194Right-handed 310
Helix 83
83
D
1201 1206Right-handed alpha
Helix 84
84
D
1220 1231Right-handed alpha
Helix 85
85
D
1232 1234Right-handed 310
Helix 86
86
D
1255 1264Right-handed alpha
Helix 87
87
D
1331 1339Right-handed alpha
Helix 88
88
D
1340 1359Right-handed alpha
Helix 89
89
D
1364 1375Right-handed alpha
Helix 90
90
D
1395 1408Right-handed alpha
Helix 91
91
D
1423 1429Right-handed alpha
Helix 92
92
D
1433 1440Right-handed alpha
Helix 93
93
D
1442 1452Right-handed alpha
Helix 94
94
D
1461 1469Right-handed alpha
Helix 95
95
D
1474 1477Right-handed 310
Helix 96
96
D
1478 1483Right-handed alpha
Helix 97
97
D
1489 1499Right-handed alpha
Helix 98
98
E
5 13Right-handed alpha
Helix 99
99
E
15 33Right-handed alpha
Helix 100
100
E
52 56Right-handed 310
Helix 101
101
E
60 69Right-handed alpha
Helix 102
102
E
81 92Right-handed alpha
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There are 42 sheets in PDB entry 4GZZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 13first strand
Strand 2
A
20 28anti-parallel
Strand 3
A
193 201anti-parallel
Strand 4
A
174 182anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 104first strand
Strand 2
A
137 145anti-parallel
Strand 3
A
52 58anti-parallel
Strand 4
A
165 166anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 88first strand
Strand 2
A
121 122anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 110first strand
Strand 2
A
128 131anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
149 151first strand
Strand 2
A
169 171anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 16first strand
Strand 2
B
20 26anti-parallel
Strand 3
B
192 201anti-parallel
Strand 4
B
174 184anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 104first strand
Strand 2
B
137 145anti-parallel
Strand 3
B
52 58anti-parallel
Strand 4
B
165 166anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
87 89first strand
Strand 2
B
120 122anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
108 110first strand
Strand 2
B
128 131anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
150 151first strand
Strand 2
B
169 170anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 5first strand
Strand 2
C
900 902parallel
Strand 3
C
579 580parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
65 68first strand
Strand 2
C
97 101anti-parallel
Strand 3
C
107 112anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
91 93first strand
Strand 2
C
117 119anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
127 128first strand
Strand 2
C
133 136anti-parallel
Strand 3
C
392 394anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
331 334first strand
Strand 2
C
138 142anti-parallel
Strand 3
C
409 411parallel
Strand 4
C
452 454anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
146 150first strand
Strand 2
C
158 162anti-parallel
Strand 3
C
172 176anti-parallel
Strand 4
C
182 185anti-parallel
Strand 5
C
190 192anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 461first strand
Strand 2
C
467 475anti-parallel
Strand 3
C
478 486anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
521 524first strand
Strand 2
C
513 516anti-parallel
Strand 3
C
496 497anti-parallel
Strand 4
C
531 532parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
503 504first strand
Strand 2
C
507 508anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
622 624first strand
Strand 2
C
610 615anti-parallel
Strand 3
C
601 606anti-parallel
Strand 4
C
648 649anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
629 630first strand
Strand 2
C
636 637anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
640 641first strand
Strand 2
C
656 657anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
661 662first strand
Strand 2
C
665 666anti-parallel
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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
971 972first strand
Strand 2
C
987 996anti-parallel
Strand 3
C
838 840anti-parallel
Strand 4
C
847 853anti-parallel
Strand 5
C
688 691parallel
Strand 6
C
869 871anti-parallel
Strand 7
C
670 676parallel
Strand 8
C
987 996anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
704 708first strand
Strand 2
C
819 829anti-parallel
Strand 3
C
711 713anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
704 708first strand
Strand 2
C
819 829anti-parallel
Strand 3
C
798 806anti-parallel
Strand 4
C
748 749anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
721 722first strand
Strand 2
C
758 759anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
754 756first strand
Strand 2
C
790 791anti-parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1006 1008first strand
Strand 2
D
626 633anti-parallel
Strand 3
D
744 748anti-parallel
Strand 4
D
700 703anti-parallel
Strand 5
D
713 721anti-parallel
Strand 6
D
641 645parallel
Strand 7
D
726 728anti-parallel
Strand 8
D
626 633parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1097 1102first strand
Strand 2
D
7 12anti-parallel
Strand 3
D
1455 1457anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
22 25first strand
Strand 2
D
90 100parallel
Strand 3
D
513 519anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
202 204first strand
Strand 2
D
394 396anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
359 361first strand
Strand 2
D
383 385anti-parallel
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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
398 402first strand
Strand 2
D
443 447anti-parallel
Strand 3
D
435 438anti-parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
420 422first strand
Strand 2
D
427 428anti-parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
528 529first strand
Strand 2
D
535 536anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
864 868first strand
Strand 2
D
871 875anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1118 1121first strand
Strand 2
D
1185 1188anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1123 1124first strand
Strand 2
D
1133 1134anti-parallel
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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1153 1154first strand
Strand 2
D
1159 1160anti-parallel
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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1392 1394first strand
Strand 2
D
1378 1381anti-parallel
Strand 3
D
1417 1419anti-parallel
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There are 2 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1487 1488first strand
Strand 2
E
73 74anti-parallel
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