Analysis of interatomic Contacts of Structural Units in PDB entry:
4HBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HBN entry

There is 1 chain in PDB entry 4HBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 520SER 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 4HBN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
522 541Right-handed alpha
Helix 2
2
A
544 560Right-handed alpha
Helix 3
3
A
565 573Right-handed alpha
Helix 4
4
A
574 586Right-handed alpha
Helix 5
5
A
586 592Right-handed alpha
Helix 6
6
A
593 598Right-handed alpha
Helix 7
7
A
600 609Right-handed alpha
Helix 8
8
A
660 666Right-handed alpha
Helix 9
9
A
686 696Right-handed alpha
Helix 10
10
A
699 715Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4HBN. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
612 616first strand
Strand 2
A
679 685anti-parallel
Strand 3
A
631 637anti-parallel
Strand 4
A
657 658anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
621 623first strand
Strand 2
A
672 675anti-parallel
Strand 3
A
640 643anti-parallel
Strand 4
A
649 652anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il