Analysis of interatomic Contacts of Structural Units in PDB entry:
4HG6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HG6 entry

There are 2 chains in PDB entry 4HG6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 13PHE 759
B
PRO 54LEU 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 4HG6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 34Right-handed alpha
Helix 2
2
A
38 57Right-handed alpha
Helix 3
3
A
58 60Right-handed 310
Helix 4
4
A
62 88Right-handed alpha
Helix 5
5
A
95 122Right-handed alpha
Helix 6
6
A
152 165Right-handed alpha
Helix 7
7
A
182 188Right-handed alpha
Helix 8
8
A
191 213Right-handed alpha
Helix 9
9
A
224 237Right-handed alpha
Helix 10
10
A
254 266Right-handed alpha
Helix 11
11
A
282 289Right-handed alpha
Helix 12
12
A
298 304Right-handed alpha
Helix 13
13
A
304 312Right-handed alpha
Helix 14
14
A
326 333Right-handed alpha
Helix 15
15
A
341 352Right-handed alpha
Helix 16
16
A
372 394Right-handed alpha
Helix 17
17
A
403 417Right-handed alpha
Helix 18
18
A
418 437Right-handed alpha
Helix 19
19
A
444 468Right-handed alpha
Helix 20
20
A
474 497Right-handed alpha
Helix 21
21
A
521 545Right-handed alpha
Helix 22
22
A
548 571Right-handed alpha
Helix 23
23
A
627 631Right-handed 310
Helix 24
24
A
678 691Right-handed alpha
Helix 25
25
A
693 704Right-handed alpha
Helix 26
26
A
708 733Right-handed alpha
Helix 27
27
A
733 744Right-handed alpha
Helix 28
28
B
164 170Right-handed alpha
Helix 29
29
B
192 207Right-handed alpha
Helix 30
30
B
219 232Right-handed alpha
Helix 31
31
B
291 300Right-handed alpha
Helix 32
32
B
405 408Right-handed 310
Helix 33
33
B
458 463Right-handed alpha
Helix 34
34
B
475 477Right-handed 310
Helix 35
35
B
478 489Right-handed alpha
Helix 36
36
B
504 507Right-handed 310
Helix 37
37
B
521 528Right-handed alpha
Helix 38
38
B
569 589Right-handed alpha
Helix 39
39
B
589 594Right-handed alpha
Helix 40
40
B
599 605Right-handed alpha
Helix 41
41
B
630 641Right-handed alpha
Helix 42
42
B
642 644Right-handed 310
Helix 43
43
B
678 693Right-handed alpha
Helix 44
44
B
693 718Right-handed alpha
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There are 12 sheets in PDB entry 4HG6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
215 218first strand
Strand 2
A
174 178parallel
Strand 3
A
142 147parallel
Strand 4
A
241 244parallel
Strand 5
A
322 325anti-parallel
Strand 6
A
271 273anti-parallel
Strand 7
A
357 359parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
249 251first strand
Strand 2
A
275 278anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
365 367anti-parallel
Strand 2
A
514 517first strand
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
574 577anti-parallel
Strand 2
A
585 594first strand
Strand 3
A
603 610anti-parallel
Strand 4
A
614 620anti-parallel
Strand 5
A
666 673anti-parallel
Strand 6
A
653 662anti-parallel
Strand 7
A
637 641anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
585 594anti-parallel
Strand 2
B
120 125first strand
Strand 3
B
112 117anti-parallel
Strand 4
B
148 156anti-parallel
Strand 5
B
80 86anti-parallel
Strand 6
B
55 62anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
180 184anti-parallel
Strand 2
B
71 73first strand
Strand 3
B
173 176anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
95 101anti-parallel
Strand 2
B
133 138parallel
Strand 3
B
241 244first strand
Strand 4
B
210 213parallel
Strand 5
B
257 262parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
277 284parallel
Strand 2
B
268 274anti-parallel
Strand 3
B
329 331first strand
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
438 440anti-parallel
Strand 2
B
362 364anti-parallel
Strand 3
B
335 343first strand
Strand 4
B
412 420anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
373 378anti-parallel
Strand 2
B
381 387anti-parallel
Strand 3
B
399 404first strand
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
355 361anti-parallel
Strand 2
B
444 448anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
316 319parallel
Strand 2
B
453 455first strand
Strand 3
B
671 674anti-parallel
Strand 4
B
471 473first strand
Strand 5
B
499 504parallel
Strand 6
B
620 625parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il