Analysis of interatomic Contacts of Structural Units in PDB entry:
4HKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HKC entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 4HKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 2SER 230
B
LYS 1006LYS 1010
B
ILE 1012LEU 1013
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 4HKC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 32Right-handed alpha
Helix 3
3
A
37 69Right-handed alpha
Helix 4
4
A
72 104Right-handed alpha
Helix 5
5
A
104 109Right-handed alpha
Helix 6
6
A
111 132Right-handed alpha
Helix 7
7
A
134 160Right-handed alpha
Helix 8
8
A
164 181Right-handed alpha
Helix 9
9
A
184 202Right-handed alpha
Helix 10
10
A
203 206Right-handed 310
Helix 11
11
A
210 229Right-handed alpha
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There are no sheets in PDB entry 4HKC

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