Analysis of interatomic Contacts of Structural Units in PDB entry:
4HVC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HVC entry

There are 2 chains in PDB entry 4HVC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1016TYR 1512
B
 GLY 1015TYR 1512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 4HVC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1023 1035Right-handed alpha
Helix 2
2
A
1050 1071Right-handed alpha
Helix 3
3
A
1084 1088Right-handed alpha
Helix 4
4
A
1094 1100Right-handed 310
Helix 5
5
A
1122 1134Right-handed alpha
Helix 6
6
A
1136 1140Right-handed 310
Helix 7
7
A
1178 1199Right-handed alpha
Helix 8
8
A
1246 1253Right-handed alpha
Helix 9
9
A
1277 1288Right-handed alpha
Helix 10
10
A
1316 1337Right-handed alpha
Helix 11
11
A
1350 1361Right-handed alpha
Helix 12
12
A
1370 1377Right-handed alpha
Helix 13
13
A
1396 1423Right-handed alpha
Helix 14
14
A
1429 1439Right-handed alpha
Helix 15
15
A
1450 1463Right-handed alpha
Helix 16
16
B
1023 1035Right-handed alpha
Helix 17
17
B
1050 1071Right-handed alpha
Helix 18
18
B
1084 1089Right-handed alpha
Helix 19
19
B
1094 1100Right-handed 310
Helix 20
20
B
1122 1134Right-handed alpha
Helix 21
21
B
1136 1140Right-handed 310
Helix 22
22
B
1178 1200Right-handed alpha
Helix 23
23
B
1246 1253Right-handed alpha
Helix 24
24
B
1277 1288Right-handed alpha
Helix 25
25
B
1296 1300Right-handed 310
Helix 26
26
B
1317 1337Right-handed alpha
Helix 27
27
B
1350 1361Right-handed alpha
Helix 28
28
B
1370 1376Right-handed alpha
Helix 29
29
B
1396 1423Right-handed alpha
Helix 30
30
B
1429 1438Right-handed alpha
Helix 31
31
B
1450 1462Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 4HVC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1038 1040first strand
Strand 2
A
1047 1049anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1074 1075first strand
Strand 2
A
1142 1151parallel
Strand 3
A
1166 1176anti-parallel
Strand 4
A
1269 1276anti-parallel
Strand 5
A
1234 1245anti-parallel
Strand 6
A
1221 1229anti-parallel
Strand 7
A
1206 1209anti-parallel
Strand 8
A
1477 1482anti-parallel
Strand 9
A
1504 1509anti-parallel
Strand 10
A
1442 1447anti-parallel
Strand 11
A
1424 1426parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1081 1083first strand
Strand 2
A
1110 1118anti-parallel
Strand 3
A
1102 1107anti-parallel
Strand 4
B
1102 1107anti-parallel
Strand 5
B
1110 1118anti-parallel
Strand 6
B
1081 1083anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1255 1257first strand
Strand 2
A
1265 1267anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1341 1343first strand
Strand 2
A
1304 1308parallel
Strand 3
A
1365 1369parallel
Strand 4
A
1378 1383anti-parallel
Strand 5
A
1389 1393anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1038 1040first strand
Strand 2
B
1047 1049anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1074 1075first strand
Strand 2
B
1142 1151parallel
Strand 3
B
1166 1176anti-parallel
Strand 4
B
1269 1276anti-parallel
Strand 5
B
1234 1245anti-parallel
Strand 6
B
1221 1229anti-parallel
Strand 7
B
1206 1209anti-parallel
Strand 8
B
1477 1482anti-parallel
Strand 9
B
1504 1509anti-parallel
Strand 10
B
1442 1447anti-parallel
Strand 11
B
1424 1426parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1255 1257first strand
Strand 2
B
1265 1267anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1341 1343first strand
Strand 2
B
1304 1308parallel
Strand 3
B
1365 1369parallel
Strand 4
B
1378 1383anti-parallel
Strand 5
B
1389 1393anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il