Analysis of interatomic Contacts of Structural Units in PDB entry:
4HYY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4HYY entry

There are 4 chains in PDB entry 4HYY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 84ALA 338
B
 GLY 84ALA 338
C
 GLY 84ALA 338
D
 GLY 84ALA 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 4HYY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 96Right-handed alpha
Helix 2
2
A
105 112Right-handed alpha
Helix 3
3
A
131 143Right-handed alpha
Helix 4
4
A
147 151Right-handed 310
Helix 5
5
A
166 178Right-handed alpha
Helix 6
6
A
180 187Right-handed alpha
Helix 7
7
A
195 213Right-handed alpha
Helix 8
8
A
226 233Right-handed alpha
Helix 9
9
A
238 260Right-handed alpha
Helix 10
10
A
289 297Right-handed alpha
Helix 11
11
A
321 323Right-handed 310
Helix 12
12
B
87 97Right-handed alpha
Helix 13
13
B
105 112Right-handed alpha
Helix 14
14
B
131 143Right-handed alpha
Helix 15
15
B
147 151Right-handed 310
Helix 16
16
B
166 177Right-handed alpha
Helix 17
17
B
180 187Right-handed alpha
Helix 18
18
B
195 213Right-handed alpha
Helix 19
19
B
226 233Right-handed alpha
Helix 20
20
B
238 260Right-handed alpha
Helix 21
21
B
289 297Right-handed alpha
Helix 22
22
B
321 323Right-handed 310
Helix 23
23
C
87 97Right-handed alpha
Helix 24
24
C
105 112Right-handed alpha
Helix 25
25
C
131 143Right-handed alpha
Helix 26
26
C
147 151Right-handed 310
Helix 27
27
C
166 168Right-handed 310
Helix 28
28
C
169 178Right-handed alpha
Helix 29
29
C
180 187Right-handed alpha
Helix 30
30
C
195 213Right-handed alpha
Helix 31
31
C
226 233Right-handed alpha
Helix 32
32
C
235 237Right-handed 310
Helix 33
33
C
238 260Right-handed alpha
Helix 34
34
C
289 297Right-handed alpha
Helix 35
35
C
321 323Right-handed 310
Helix 36
36
D
88 97Right-handed alpha
Helix 37
37
D
105 113Right-handed alpha
Helix 38
38
D
131 143Right-handed alpha
Helix 39
39
D
147 151Right-handed 310
Helix 40
40
D
166 177Right-handed alpha
Helix 41
41
D
180 187Right-handed alpha
Helix 42
42
D
195 213Right-handed alpha
Helix 43
43
D
226 233Right-handed alpha
Helix 44
44
D
238 260Right-handed alpha
Helix 45
45
D
289 297Right-handed alpha
Helix 46
46
D
321 323Right-handed 310
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There are 8 sheets in PDB entry 4HYY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
B
188 192anti-parallel
Strand 3
B
155 160parallel
Strand 4
B
217 223parallel
Strand 5
B
263 268parallel
Strand 6
B
120 126parallel
Strand 7
B
299 304parallel
Strand 8
B
310 315anti-parallel
Strand 9
B
325 329anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
116 117anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 192first strand
Strand 2
A
155 160parallel
Strand 3
A
217 223parallel
Strand 4
A
263 268parallel
Strand 5
A
120 126parallel
Strand 6
A
299 305parallel
Strand 7
A
310 315anti-parallel
Strand 8
A
325 331anti-parallel
Strand 9
A
334 337anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
116 117anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
116 117anti-parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
334 336first strand
Strand 2
C
325 331anti-parallel
Strand 3
C
310 315anti-parallel
Strand 4
C
299 305anti-parallel
Strand 5
C
120 126parallel
Strand 6
C
263 268parallel
Strand 7
C
217 223parallel
Strand 8
C
155 160parallel
Strand 9
C
188 192parallel
Strand 10
D
86 87anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
100 101first strand
Strand 2
D
116 117anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
188 192first strand
Strand 2
D
155 160parallel
Strand 3
D
217 223parallel
Strand 4
D
263 268parallel
Strand 5
D
120 125parallel
Strand 6
D
299 305parallel
Strand 7
D
310 315anti-parallel
Strand 8
D
325 331anti-parallel
Strand 9
D
334 337anti-parallel
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