Analysis of interatomic Contacts of Structural Units in PDB entry:
4IME


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4IME entry

There are 5 chains in PDB entry 4IME (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 293
B
 MET 1SER 293
C
 MET 1SER 293
D
 MET 1SER 293
E
 MET 1THR 96
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 4IME. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 36Right-handed alpha
Helix 2
2
A
46 54Right-handed 310
Helix 3
3
A
55 71Right-handed alpha
Helix 4
4
A
84 99Right-handed alpha
Helix 5
5
A
114 130Right-handed alpha
Helix 6
6
A
138 143Right-handed alpha
Helix 7
7
A
147 156Right-handed alpha
Helix 8
8
A
169 180Right-handed alpha
Helix 9
9
A
189 191Right-handed 310
Helix 10
10
A
192 199Right-handed alpha
Helix 11
11
A
208 225Right-handed alpha
Helix 12
12
A
227 249Right-handed alpha
Helix 13
13
A
249 260Right-handed alpha
Helix 14
14
A
277 292Right-handed alpha
Helix 15
15
B
22 36Right-handed alpha
Helix 16
16
B
46 54Right-handed 310
Helix 17
17
B
55 71Right-handed alpha
Helix 18
18
B
84 98Right-handed alpha
Helix 19
19
B
114 130Right-handed alpha
Helix 20
20
B
138 143Right-handed alpha
Helix 21
21
B
147 156Right-handed alpha
Helix 22
22
B
169 180Right-handed alpha
Helix 23
23
B
189 191Right-handed 310
Helix 24
24
B
192 199Right-handed alpha
Helix 25
25
B
208 225Right-handed alpha
Helix 26
26
B
227 249Right-handed alpha
Helix 27
27
B
249 260Right-handed alpha
Helix 28
28
B
277 292Right-handed alpha
Helix 29
29
C
22 36Right-handed alpha
Helix 30
30
C
46 54Right-handed 310
Helix 31
31
C
55 71Right-handed alpha
Helix 32
32
C
84 99Right-handed alpha
Helix 33
33
C
114 130Right-handed alpha
Helix 34
34
C
138 143Right-handed alpha
Helix 35
35
C
147 156Right-handed alpha
Helix 36
36
C
169 180Right-handed alpha
Helix 37
37
C
189 191Right-handed 310
Helix 38
38
C
192 199Right-handed alpha
Helix 39
39
C
208 225Right-handed alpha
Helix 40
40
C
227 249Right-handed alpha
Helix 41
41
C
249 260Right-handed alpha
Helix 42
42
C
277 292Right-handed alpha
Helix 43
43
D
22 36Right-handed alpha
Helix 44
44
D
46 54Right-handed 310
Helix 45
45
D
55 71Right-handed alpha
Helix 46
46
D
84 98Right-handed alpha
Helix 47
47
D
114 130Right-handed alpha
Helix 48
48
D
138 143Right-handed alpha
Helix 49
49
D
147 156Right-handed alpha
Helix 50
50
D
169 180Right-handed alpha
Helix 51
51
D
189 191Right-handed 310
Helix 52
52
D
192 199Right-handed alpha
Helix 53
53
D
208 225Right-handed alpha
Helix 54
54
D
227 249Right-handed alpha
Helix 55
55
D
249 260Right-handed alpha
Helix 56
56
D
277 292Right-handed alpha
Helix 57
57
E
22 36Right-handed alpha
Helix 58
58
E
46 54Right-handed 310
Helix 59
59
E
55 71Right-handed alpha
Helix 60
60
E
84 99Right-handed alpha
Helix 61
61
E
114 130Right-handed alpha
Helix 62
62
E
138 143Right-handed alpha
Helix 63
63
E
147 156Right-handed alpha
Helix 64
64
E
169 180Right-handed alpha
Helix 65
65
E
189 191Right-handed 310
Helix 66
66
E
192 199Right-handed alpha
Helix 67
67
E
208 225Right-handed alpha
Helix 68
68
E
227 249Right-handed alpha
Helix 69
69
E
249 260Right-handed alpha
Helix 70
70
E
277 292Right-handed alpha
Helix 71
71
F
22 36Right-handed alpha
Helix 72
72
F
46 54Right-handed 310
Helix 73
73
F
55 71Right-handed alpha
Helix 74
74
F
84 99Right-handed alpha
Helix 75
75
F
114 130Right-handed alpha
Helix 76
76
F
138 143Right-handed alpha
Helix 77
77
F
147 156Right-handed alpha
Helix 78
78
F
169 180Right-handed alpha
Helix 79
79
F
189 191Right-handed 310
Helix 80
80
F
192 199Right-handed alpha
Helix 81
81
F
208 225Right-handed alpha
Helix 82
82
F
227 249Right-handed alpha
Helix 83
83
F
249 260Right-handed alpha
Helix 84
84
F
277 292Right-handed alpha
Helix 85
85
G
22 36Right-handed alpha
Helix 86
86
G
46 54Right-handed 310
Helix 87
87
G
55 71Right-handed alpha
Helix 88
88
G
84 99Right-handed alpha
Helix 89
89
G
114 130Right-handed alpha
Helix 90
90
G
138 143Right-handed alpha
Helix 91
91
G
147 155Right-handed alpha
Helix 92
92
G
169 180Right-handed alpha
Helix 93
93
G
189 191Right-handed 310
Helix 94
94
G
192 199Right-handed alpha
Helix 95
95
G
208 225Right-handed alpha
Helix 96
96
G
227 249Right-handed alpha
Helix 97
97
G
249 261Right-handed alpha
Helix 98
98
G
277 292Right-handed alpha
Helix 99
99
H
22 36Right-handed alpha
Helix 100
100
H
46 54Right-handed 310
Helix 101
101
H
55 71Right-handed alpha
Helix 102
102
H
84 99Right-handed alpha
Helix 103
103
H
114 130Right-handed alpha
Helix 104
104
H
138 143Right-handed alpha
Helix 105
105
H
147 156Right-handed alpha
Helix 106
106
H
169 180Right-handed alpha
Helix 107
107
H
189 191Right-handed 310
Helix 108
108
H
192 199Right-handed alpha
Helix 109
109
H
208 225Right-handed alpha
Helix 110
110
H
227 249Right-handed alpha
Helix 111
111
H
249 260Right-handed alpha
Helix 112
112
H
277 292Right-handed alpha
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There are 8 sheets in PDB entry 4IME. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
41 44parallel
Strand 3
A
75 79parallel
Strand 4
A
102 106parallel
Strand 5
A
133 137parallel
Strand 6
A
160 165parallel
Strand 7
A
184 187parallel
Strand 8
A
203 206parallel
Strand 9
A
6 10parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
41 44parallel
Strand 3
B
75 79parallel
Strand 4
B
102 106parallel
Strand 5
B
133 137parallel
Strand 6
B
160 165parallel
Strand 7
B
184 187parallel
Strand 8
B
203 206parallel
Strand 9
B
6 10parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
41 44parallel
Strand 3
C
75 79parallel
Strand 4
C
102 106parallel
Strand 5
C
133 137parallel
Strand 6
C
160 165parallel
Strand 7
C
184 187parallel
Strand 8
C
203 206parallel
Strand 9
C
6 10parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 10first strand
Strand 2
D
41 44parallel
Strand 3
D
75 79parallel
Strand 4
D
102 106parallel
Strand 5
D
133 137parallel
Strand 6
D
160 165parallel
Strand 7
D
184 187parallel
Strand 8
D
203 206parallel
Strand 9
D
6 10parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 10first strand
Strand 2
E
41 44parallel
Strand 3
E
75 79parallel
Strand 4
E
102 106parallel
Strand 5
E
133 137parallel
Strand 6
E
160 165parallel
Strand 7
E
184 187parallel
Strand 8
E
203 206parallel
Strand 9
E
6 10parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6 10first strand
Strand 2
F
41 44parallel
Strand 3
F
75 79parallel
Strand 4
F
102 106parallel
Strand 5
F
133 137parallel
Strand 6
F
160 165parallel
Strand 7
F
184 187parallel
Strand 8
F
203 206parallel
Strand 9
F
6 10parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
6 10first strand
Strand 2
G
41 44parallel
Strand 3
G
75 79parallel
Strand 4
G
102 106parallel
Strand 5
G
133 137parallel
Strand 6
G
160 165parallel
Strand 7
G
184 187parallel
Strand 8
G
203 206parallel
Strand 9
G
6 10parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
6 10first strand
Strand 2
H
41 44parallel
Strand 3
H
75 79parallel
Strand 4
H
102 106parallel
Strand 5
H
133 137parallel
Strand 6
H
160 165parallel
Strand 7
H
184 187parallel
Strand 8
H
203 206parallel
Strand 9
H
6 10parallel
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