Analysis of interatomic Contacts of Structural Units in PDB entry:
4J6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4J6S entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 4J6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ASP 236
B
 ALA -3ASP 239
C
 GLY 0SER 235
D
 ALA -3ASP 236
E
 ARG 502VAL 504
E
 GLU 506ASP 508
F
 ARG 501VAL 504
F
 GLU 506ALA 509
G
 ARG 501VAL 504
G
 GLU 506ALA 509
H
 ARG 501VAL 504
H
 GLU 506ALA 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4J6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 17Right-handed alpha
Helix 2
2
A
19 33Right-handed alpha
Helix 3
3
A
38 74Right-handed alpha
Helix 4
4
A
75 107Right-handed alpha
Helix 5
5
A
116 138Right-handed alpha
Helix 6
6
A
140 165Right-handed alpha
Helix 7
7
A
169 186Right-handed alpha
Helix 8
8
A
189 207Right-handed alpha
Helix 9
9
A
208 211Right-handed 310
Helix 10
10
A
212 234Right-handed alpha
Helix 11
11
B
3 17Right-handed alpha
Helix 12
12
B
19 33Right-handed alpha
Helix 13
13
B
38 74Right-handed alpha
Helix 14
14
B
75 107Right-handed alpha
Helix 15
15
B
116 138Right-handed alpha
Helix 16
16
B
139 165Right-handed alpha
Helix 17
17
B
169 186Right-handed alpha
Helix 18
18
B
189 207Right-handed alpha
Helix 19
19
B
208 211Right-handed 310
Helix 20
20
B
212 234Right-handed alpha
Helix 21
21
C
3 17Right-handed alpha
Helix 22
22
C
19 33Right-handed alpha
Helix 23
23
C
38 73Right-handed alpha
Helix 24
24
C
75 107Right-handed alpha
Helix 25
25
C
116 136Right-handed alpha
Helix 26
26
C
139 165Right-handed alpha
Helix 27
27
C
169 186Right-handed alpha
Helix 28
28
C
189 207Right-handed alpha
Helix 29
29
C
208 211Right-handed 310
Helix 30
30
C
212 234Right-handed alpha
Helix 31
31
D
3 17Right-handed alpha
Helix 32
32
D
19 33Right-handed alpha
Helix 33
33
D
38 74Right-handed alpha
Helix 34
34
D
75 107Right-handed alpha
Helix 35
35
D
116 136Right-handed alpha
Helix 36
36
D
139 165Right-handed alpha
Helix 37
37
D
169 186Right-handed alpha
Helix 38
38
D
189 207Right-handed alpha
Helix 39
39
D
208 211Right-handed 310
Helix 40
40
D
212 234Right-handed alpha
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There are no sheets in PDB entry 4J6S
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