Analysis of interatomic Contacts of Structural Units in PDB entry:
4JPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JPZ entry

There are 6 chains in PDB entry 4JPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 11ASP 158
B
 GLU 1788SER 1929
C
 GLU 7LYS 149
E
 PRO 11ASP 158
H
 GLU 1788SER 1929
I
 GLU 7LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 4JPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 47Right-handed 310
Helix 2
2
A
85 88Right-handed 310
Helix 3
3
A
128 132Right-handed 310
Helix 4
4
A
136 139Right-handed 310
Helix 5
5
B
1791 1806Right-handed alpha
Helix 6
6
B
1817 1824Right-handed alpha
Helix 7
7
B
1835 1840Right-handed alpha
Helix 8
8
B
1854 1867Right-handed alpha
Helix 9
9
B
1869 1887Right-handed alpha
Helix 10
10
B
1900 1927Right-handed alpha
Helix 11
11
C
9 21Right-handed alpha
Helix 12
12
C
29 41Right-handed alpha
Helix 13
13
C
45 55Right-handed alpha
Helix 14
14
C
65 78Right-handed alpha
Helix 15
15
C
86 92Right-handed alpha
Helix 16
16
C
103 113Right-handed alpha
Helix 17
17
C
118 130Right-handed alpha
Helix 18
18
C
139 147Right-handed alpha
Helix 19
19
E
44 47Right-handed 310
Helix 20
20
E
85 87Right-handed 310
Helix 21
21
E
128 132Right-handed 310
Helix 22
22
E
136 139Right-handed 310
Helix 23
23
H
1791 1806Right-handed alpha
Helix 24
24
H
1817 1824Right-handed alpha
Helix 25
25
H
1835 1840Right-handed alpha
Helix 26
26
H
1854 1867Right-handed alpha
Helix 27
27
H
1869 1887Right-handed alpha
Helix 28
28
H
1900 1928Right-handed alpha
Helix 29
29
I
8 21Right-handed alpha
Helix 30
30
I
29 41Right-handed alpha
Helix 31
31
I
45 55Right-handed alpha
Helix 32
32
I
65 78Right-handed alpha
Helix 33
33
I
86 92Right-handed alpha
Helix 34
34
I
103 113Right-handed alpha
Helix 35
35
I
118 130Right-handed alpha
Helix 36
36
I
139 148Right-handed alpha
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There are no sheets in PDB entry 4JPZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il