Analysis of interatomic Contacts of Structural Units in PDB entry:
4JQ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4JQ0 entry

There are 3 chains in PDB entry 4JQ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12ARG 152
C
 GLU 7ALA 148
D
 LEU 1786LEU 1927
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4JQ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 46Right-handed 310
Helix 2
2
A
85 88Right-handed 310
Helix 3
3
A
128 132Right-handed 310
Helix 4
4
C
8 21Right-handed alpha
Helix 5
5
C
29 40Right-handed alpha
Helix 6
6
C
45 55Right-handed alpha
Helix 7
7
C
65 78Right-handed alpha
Helix 8
8
C
86 94Right-handed alpha
Helix 9
9
C
103 113Right-handed alpha
Helix 10
10
C
118 130Right-handed alpha
Helix 11
11
C
139 147Right-handed alpha
Helix 12
12
D
1787 1802Right-handed alpha
Helix 13
13
D
1811 1821Right-handed alpha
Helix 14
14
D
1831 1838Right-handed alpha
Helix 15
15
D
1850 1863Right-handed alpha
Helix 16
16
D
1866 1883Right-handed alpha
Helix 17
17
D
1896 1926Right-handed alpha
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There are no sheets in PDB entry 4JQ0
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il