Analysis of interatomic Contacts of Structural Units in PDB entry:
4KG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4KG8 entry

There are 3 chains in PDB entry 4KG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 92VAL 240
B
ASN 93VAL 240
C
ASN 93VAL 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 4KG8


There are 8 sheets in PDB entry 4KG8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
113 115first strand
Strand 2
A
95 102anti-parallel
Strand 3
A
122 124anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
113 115first strand
Strand 2
A
95 102anti-parallel
Strand 3
A
234 239anti-parallel
Strand 4
A
139 151anti-parallel
Strand 5
A
197 209anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
126 129first strand
Strand 2
A
132 135anti-parallel
Strand 3
A
214 220anti-parallel
Strand 4
A
162 169anti-parallel
Strand 5
A
177 184anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
114 115first strand
Strand 2
B
95 100anti-parallel
Strand 3
B
122 124anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
114 115first strand
Strand 2
B
95 100anti-parallel
Strand 3
B
234 239anti-parallel
Strand 4
B
139 149anti-parallel
Strand 5
B
199 209anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
127 129first strand
Strand 2
B
132 134anti-parallel
Strand 3
B
214 219anti-parallel
Strand 4
B
162 169anti-parallel
Strand 5
B
177 184anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
122 124first strand
Strand 2
C
95 99anti-parallel
Strand 3
C
234 239anti-parallel
Strand 4
C
139 150anti-parallel
Strand 5
C
198 209anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
126 129first strand
Strand 2
C
132 135anti-parallel
Strand 3
C
214 220anti-parallel
Strand 4
C
162 169anti-parallel
Strand 5
C
177 184anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il