Analysis of interatomic Contacts of Structural Units in PDB entry:
4L59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4L59 entry

There is 1 chain in PDB entry 4L59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TRP 232LEU 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4L59. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
233 241Right-handed alpha
Helix 2
2
A
247 251Right-handed 310
Helix 3
3
A
302 306Right-handed 310
Helix 4
4
A
320 326Right-handed alpha
Helix 5
5
A
336 340Right-handed 310
Helix 6
6
A
341 350Right-handed alpha
Helix 7
7
A
355 359Right-handed 310
Helix 8
8
A
409 413Right-handed 310
Helix 9
9
A
427 432Right-handed alpha
Helix 10
10
A
444 448Right-handed 310
Helix 11
11
A
449 457Right-handed alpha
Helix 12
12
A
463 467Right-handed 310
Helix 13
13
A
513 517Right-handed 310
Helix 14
14
A
531 537Right-handed alpha
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There are 5 sheets in PDB entry 4L59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
307 310first strand
Strand 2
A
293 298anti-parallel
Strand 3
A
277 290anti-parallel
Strand 4
A
269 274anti-parallel
Strand 5
A
316 317anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
307 310first strand
Strand 2
A
293 298anti-parallel
Strand 3
A
277 290anti-parallel
Strand 4
A
329 330parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
414 416first strand
Strand 2
A
400 405anti-parallel
Strand 3
A
388 397anti-parallel
Strand 4
A
376 380anti-parallel
Strand 5
A
423 424anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
414 416first strand
Strand 2
A
400 405anti-parallel
Strand 3
A
388 397anti-parallel
Strand 4
A
436 437parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
518 521first strand
Strand 2
A
504 509anti-parallel
Strand 3
A
492 500anti-parallel
Strand 4
A
480 484anti-parallel
Strand 5
A
527 528anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il