Analysis of interatomic Contacts of Structural Units in PDB entry:
4LG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LG8 entry

There is 1 chain in PDB entry 4LG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 195LEU 504
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 4LG8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
200 205Right-handed alpha
Helix 2
2
A
485 488Right-handed 310
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There are 7 sheets in PDB entry 4LG8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
208 213first strand
Strand 2
A
499 503anti-parallel
Strand 3
A
490 494anti-parallel
Strand 4
A
478 483anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
224 230first strand
Strand 2
A
233 241anti-parallel
Strand 3
A
246 250anti-parallel
Strand 4
A
255 260anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
269 272first strand
Strand 2
A
278 282anti-parallel
Strand 3
A
288 292anti-parallel
Strand 4
A
297 302anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
309 314first strand
Strand 2
A
320 325anti-parallel
Strand 3
A
329 334anti-parallel
Strand 4
A
340 345anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
353 358first strand
Strand 2
A
364 369anti-parallel
Strand 3
A
374 378anti-parallel
Strand 4
A
383 388anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
395 400first strand
Strand 2
A
406 411anti-parallel
Strand 3
A
415 420anti-parallel
Strand 4
A
425 431anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
438 443first strand
Strand 2
A
449 454anti-parallel
Strand 3
A
457 461anti-parallel
Strand 4
A
466 471anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il