Analysis of interatomic Contacts of Structural Units in PDB entry:
4LHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4LHY entry

There are 6 chains in PDB entry 4LHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LEU 177
B
 LYS 3LEU 177
C
 GLY 157LYS 228
D
 GLY 157GLY 227
E
 GLY 157LEU 232
F
 GLY 157LEU 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4LHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 29Right-handed alpha
Helix 2
2
A
67 69Right-handed 310
Helix 3
3
A
70 80Right-handed alpha
Helix 4
4
A
92 110Right-handed alpha
Helix 5
5
A
125 129Right-handed 310
Helix 6
6
A
132 143Right-handed alpha
Helix 7
7
A
157 176Right-handed alpha
Helix 8
8
B
20 29Right-handed alpha
Helix 9
9
B
67 69Right-handed 310
Helix 10
10
B
70 80Right-handed alpha
Helix 11
11
B
92 110Right-handed alpha
Helix 12
12
B
132 144Right-handed alpha
Helix 13
13
B
157 176Right-handed alpha
Helix 14
14
C
159 173Right-handed alpha
Helix 15
15
C
176 228Right-handed alpha
Helix 16
16
D
158 164Right-handed alpha
Helix 17
17
D
166 171Right-handed alpha
Helix 18
18
D
171 224Right-handed alpha
Helix 19
19
E
158 231Right-handed alpha
Helix 20
20
F
161 232Right-handed alpha
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There are 2 sheets in PDB entry 4LHY. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 52first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
8 14parallel
Strand 4
A
83 89parallel
Strand 5
A
115 121parallel
Strand 6
A
146 150parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 52first strand
Strand 2
B
55 64anti-parallel
Strand 3
B
7 15parallel
Strand 4
B
83 89parallel
Strand 5
B
115 121parallel
Strand 6
B
146 150parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il