Analysis of interatomic Contacts of Structural Units in PDB entry:
4M7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4M7P entry

There is 1 chain in PDB entry 4M7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6ALA 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 4M7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 23Right-handed 310
Helix 2
2
A
24 34Right-handed alpha
Helix 3
3
A
43 45Right-handed 310
Helix 4
4
A
46 52Right-handed alpha
Helix 5
5
A
77 100Right-handed alpha
Helix 6
6
A
114 125Right-handed alpha
Helix 7
7
A
140 145Right-handed alpha
Helix 8
8
A
145 152Right-handed alpha
Helix 9
9
A
153 155Right-handed 310
Helix 10
10
A
156 172Right-handed alpha
Helix 11
11
A
178 185Right-handed alpha
Helix 12
12
A
194 198Right-handed 310
Helix 13
13
A
200 204Right-handed 310
Helix 14
14
A
248 258Right-handed alpha
Helix 15
15
A
292 300Right-handed alpha
Helix 16
16
A
308 318Right-handed alpha
Helix 17
17
A
328 341Right-handed alpha
Helix 18
18
A
353 365Right-handed alpha
Helix 19
19
A
367 385Right-handed alpha
Helix 20
20
A
386 396Right-handed alpha
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There are 2 sheets in PDB entry 4M7P. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
37 42parallel
Strand 3
A
9 13parallel
Strand 4
A
107 111parallel
Strand 5
A
128 132parallel
Strand 6
A
189 191parallel
Strand 7
A
209 211parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 288first strand
Strand 2
A
263 268parallel
Strand 3
A
233 237parallel
Strand 4
A
302 305parallel
Strand 5
A
322 324parallel
Strand 6
A
344 346parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il